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Streptococcus pneumoniae G54 (spne4)
Gene : ACF55971.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  44/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.102.3
:633 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   30->436 3e7jA PDBj 1e-22 11.9 %
:HMM:SCOP  51->286 1qazA_ a.102.3.1 * 2.7e-35 29.8 %
:RPS:PFM   348->483 PF07940 * Hepar_II_III 5e-16 35.9 %
:HMM:PFM   347->484 PF07940 * Hepar_II_III 7.4e-26 30.8 133/139  
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55971.1 GT:GENE ACF55971.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 286766..288667 GB:FROM 286766 GB:TO 288667 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:NOTE identified by match to protein family HMM PF07940 GB:PROTEIN_ID ACF55971.1 GB:DB_XREF GI:194357523 LENGTH 633 SQ:AASEQ MKEERRQFFERIDGNQCRDYILSHCSKDYEKVKSSLERLMDNRFMFDSPWDMEPCSKIHQIQPMVWDQVFEDDPEWAYMLNRQEYLLQFMIGYVVEGDKDYIQKCKFFLFDWIEQVREFSPQSLMTRTLDTGIRSFTWLKLLLLLLKFDLLEEKELEKILVSLEKQIDFMKSHYRAKYTLSNWGILQTIPMLAIYYFFSDKMDLEEAYHFASEELKQQIETQILGDGSQFEQSILYHVEVYKALLDLCLLLPDLQDSYRELLEKMATYIQMMTGLDGRTLAFGDSDSTETTEILSLSAVVLNKEDLLNGLDVKVDLLSLLFLGREKVKRLQEFEKRAWQPKSMIFEDSGHVCIKDEHRYLFFKNGPLGSAHSHSDENSFCLQYQGQPIFIDAGRYSYREIYERYLLKSAWSHSTCIVDGKAPERITGSWEYEYYPHSLFCHHKEREGVHYIEGAYWSAEPDLPYLHKRKILMLVEDVWLLVDDIRCQGQHEALTQFILDKDVTYQDGKINQLRLWSEVDFDLEDTIISPKYNELERSSKLTKRQFFENQMLDYTIIAHESFEIIRHSVYQTDDREVENALAFEVKNDETDKLILLLSEDIRVGEKLCLVDGTKMRGKCLVYDKINERMIRLQC GT:EXON 1|1-633:0| SEG 139->165|lkllllllkfdlleekelekilvslek| SEG 244->256|lldlclllpdlqd| RP:PDB:NREP 1 RP:PDB:REP 30->436|3e7jA|1e-22|11.9|387/743| RP:PFM:NREP 1 RP:PFM:REP 348->483|PF07940|5e-16|35.9|131/136|Hepar_II_III| HM:PFM:NREP 1 HM:PFM:REP 347->484|PF07940|7.4e-26|30.8|133/139|Hepar_II_III| HM:SCP:REP 51->286|1qazA_|2.7e-35|29.8|225/0|a.102.3.1|1/1|Chondroitin AC/alginate lyase| OP:NHOMO 50 OP:NHOMOORG 45 OP:PATTERN -------------------------------------------------------------------- --1-----------------------------------------------------------------------------------------------------------------------------------2-----------1--------------------------------------------------------------------1-------------------------------------1---11----------1---------1111------211111111111111111211111-11---111----------------------122---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 387 STR:RPRED 61.1 SQ:SECSTR #############################HHHHcG#GGHHHHHHHHHHTccccTT##########TccccccHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccc#cccTTTHHHHHHHHHHHHH#HHHHTGGGccHHHHHHHHHHHHHHHTTcTTccccccccccccGGGTHHHHTHHHHHHHHTTTTcTHHHHHHHHHHHHTHHHHHHGGGcccccHHHHHHHHHHHHHHHHHHHHHTTcccccGGGGGTTHHHHHTccTTccccccccccccc######ccccccHHHHHHHHHHHTcHHHHHHHHTcccccGGGHHHHHHHcccEEETTTTcEEEEETTcEEEEEEcccccccTccccTTcEEEEEccEEEccc#ccccTTcHHHHHTTTcGGGcccEEEEcTTcccccTTcccccccc##################################################################################################################################################################################################### DISOP:02AL 1-5| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEcccccccccccccccccccccccccccHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHEEEccccccccccccccccccccccccHHHHHHHHcccccccccccccccccEEEEEcccEEEEEEccccccccccccccEEEEEEccEEEEEcccccccccHHHHHHHcccccccEEEEccccHHHcccccccccccccEEEEEEccEEEEEEEccEEccccccccEEEEEEEEEcccEEEEEEEEEccccEEEEEEEEEcccEEEEccccEEEEEEccccEEEEEEEEcHHHHHHHHcHHHHHccccccccEEEEEEEcccEEEEEEcccccccccccccEEEEEEcccccEEEEEEcccEEEEEEEEEEccEEEEEEEEEEEcccccEEEEcc //