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Streptococcus pneumoniae G54 (spne4)
Gene : ACF55996.1
DDBJ      :             primosomal protein N'
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  858/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
c.37.1c.52.3
:798 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   4->90 2d7hA PDBj 2e-06 49.4 %
:BLT:PDB   257->423 2eyqB PDBj 2e-11 33.5 %
:BLT:PDB   572->655 1d2mA PDBj 6e-07 42.5 %
:RPS:PDB   4->112 2d7hA PDBj 2e-25 34.7 %
:RPS:PDB   256->705 1br2A PDBj 4e-63 13.0 %
:RPS:PDB   701->786 2ar5A PDBj 6e-04 17.6 %
:RPS:SCOP  255->436 2eyqA3  c.37.1.19 * 1e-43 29.1 %
:RPS:SCOP  485->610 1dzfA1  c.52.3.1 * 1e-36 8.9 %
:HMM:SCOP  254->441 1c4oA1 c.37.1.19 * 2.9e-44 34.1 %
:HMM:SCOP  524->704 1gkuB2 c.37.1.16 * 3.9e-38 28.9 %
:RPS:PFM   285->385 PF00270 * DEAD 1e-05 35.1 %
:RPS:PFM   574->657 PF00271 * Helicase_C 3e-06 38.6 %
:HMM:PFM   260->424 PF04851 * ResIII 1.2e-17 27.0 152/184  
:HMM:PFM   583->656 PF00271 * Helicase_C 1.6e-11 32.3 62/78  
:HMM:PFM   512->549 PF07191 * DUF1407 0.00015 25.0 36/70  
:BLT:SWISS 1->798 PRIA_BACSU 0.0 45.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55996.1 GT:GENE ACF55996.1 GT:PRODUCT primosomal protein N' GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(1588096..1590492) GB:FROM 1588096 GB:TO 1590492 GB:DIRECTION - GB:PRODUCT primosomal protein N' GB:NOTE identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; match to protein family HMM TIGR00595 GB:PROTEIN_ID ACF55996.1 GB:DB_XREF GI:194357548 LENGTH 798 SQ:AASEQ MALAKIIVDVPLMQTDQPYSYRIPEEFEGMLEVGMRVHVPFGKGNRLIQGIVLGLESQSDGEEMEQDLKDIAEVLDFSPVLTPEQLWLAEELRKSVFSYKISILKAMLPGFLNSSYDKILYPLEGLSQEERVRLFGSEDSLAFSSLDLGKQAEMMRLTRKGLLGLEYQAVDQKKVKTQSWYEVDHAQLEGVEISTRAKKKLELRDYLLSHPESASLASLLESYSREQVNFFVDQGAVTIVQKEVRRSAAYFEGIEASRPLELNPEQRQARDAVVSSIGSSQPPFLLQGITGSGKTEVYLQIIQGALDKGKTAILLVPEISLTPQMTERFIARFGDKVAILHSGLSNGEKYDEWRKVERGDAQVVVGARSAIFAPLKNLGVMIIDEEHEAAYKQDSNPRYHAREVAILRAQYNQATLVLGSATPSLESRARAGKGVYQHLRLTQRANPLATIPEVQVIDFRDYIGQNETSNFTPPLLEAIQDRLVKKEQVVLMLNRRGYSSFVMCRECGTVDTCPNCDISLTLHMDTKTMNCHYCGFSKDIPQVCPNCKSRSIRYYGTGTQKAYDELAELFPQARILRMDVDTTRKKGSHQALLDQFGRGEADILLGTQMIAKGLDFPNVTLVGVLNADTALNLPDFRSSERTFQLLTQVAGRAGRAEKAGQVLIQSYNSQHYAIRFAKDQDYEGFYAYEMGIRRQLGYPPYYFTIGITLSHKKEEEVFKRAYEVMNILRSGLSETSPILGPTPKPIARTHNLYHYQILIKYRLEDELGPTLNQVLALTQERENSELRLSIDHEPQQFL GT:EXON 1|1-798:0| BL:SWS:NREP 1 BL:SWS:REP 1->798|PRIA_BACSU|0.0|45.4|793/805| SEG 207->222|llshpesaslaslles| BL:PDB:NREP 3 BL:PDB:REP 4->90|2d7hA|2e-06|49.4|77/102| BL:PDB:REP 257->423|2eyqB|2e-11|33.5|155/1143| BL:PDB:REP 572->655|1d2mA|6e-07|42.5|73/552| RP:PDB:NREP 3 RP:PDB:REP 4->112|2d7hA|2e-25|34.7|101/102| RP:PDB:REP 256->705|1br2A|4e-63|13.0|446/673| RP:PDB:REP 701->786|2ar5A|6e-04|17.6|85/117| RP:PFM:NREP 2 RP:PFM:REP 285->385|PF00270|1e-05|35.1|97/167|DEAD| RP:PFM:REP 574->657|PF00271|3e-06|38.6|70/76|Helicase_C| HM:PFM:NREP 3 HM:PFM:REP 260->424|PF04851|1.2e-17|27.0|152/184|ResIII| HM:PFM:REP 583->656|PF00271|1.6e-11|32.3|62/78|Helicase_C| HM:PFM:REP 512->549|PF07191|0.00015|25.0|36/70|DUF1407| GO:PFM:NREP 6 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00270|IPR011545| GO:PFM GO:0005524|"GO:ATP binding"|PF00270|IPR011545| GO:PFM GO:0008026|"GO:ATP-dependent helicase activity"|PF00270|IPR011545| GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00271|IPR001650| GO:PFM GO:0004386|"GO:helicase activity"|PF00271|IPR001650| GO:PFM GO:0005524|"GO:ATP binding"|PF00271|IPR001650| RP:SCP:NREP 2 RP:SCP:REP 255->436|2eyqA3|1e-43|29.1|172/233|c.37.1.19| RP:SCP:REP 485->610|1dzfA1|1e-36|8.9|124/139|c.52.3.1| HM:SCP:REP 254->441|1c4oA1|2.9e-44|34.1|185/408|c.37.1.19|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 524->704|1gkuB2|3.9e-38|28.9|173/248|c.37.1.16|2/2|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 1090 OP:NHOMOORG 863 OP:PATTERN -------------------------------------------------------------------- 111-12111121211-111-111111111111211111-1--1-111-121111---111-1-1-11111-1------1111-1-31-111111111--11111111111111111111111111113111111111111121211211222122221111211122111121121111221111-2211111111111111111111111111111111111111111111121111111111111111111121211212221111111131111111111111111122212112111111111111111211222111111111111111111111111111111111111111111112111111122112111111121111211111111111121111111-11111111111111111111121111111111111111111111111111111111121111111111111111111111111111111111112222222222222222222222222111111111221112111212211222221111111221222112111111111111211111111111111121111111111121222222222221111112222122212222112222222222221-112221--11122211112222222222-2222122222222222221111111111111111111111111222222121-111111111111--12111112222122221111111111-122111111111122222221221211112122111111111211112222222111222222222211111111111111111112111111111---------------------1122211132211 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------113-1---1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 676 STR:RPRED 84.7 SQ:SECSTR ccccccccccccccccccccccccTTccTcccTTcEEEEEETTTEEEEEEEcccccccccccGGGGccccccEEccccccccHHHHHHHHHHHHHTTccHHHHHHHHHHHHH##############################################################################################################cccHHHHHHHHHTTEEEcccccccHHcccccccccGGGccccHHHHHHHHHHHHHHHTccEEEEEccTTccHHHHHHHHHHHHHHHHTTHHHHHHHHHEEcccccTTEEccEEEEEEcTTccEEEEEEEEEcccGGGGTcccTTccccHHHHHHHHHccTcccTTTcTTcTTcccccccccHHHHHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHTccHHHHHHHHHcHHHHHHHTHHHHHHHHHHHHccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccccccccHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHTTTTEEEEEEcTTHHHHHHccccHHHHHHHHTcccHHHHHHTcccHHHHHHHHHHHTcEEEEEEEEcccccccTTcccHHHHHcHHHHHTTHHHHHHHHHHcccEEEEHHccccEEccHHHHHHHHHHHHHHHHTTEEcccHHHHHHHTcEEccccEETTEEEEcTTcccHHHHHHHHHHHHHHcHHTcHH############ PSIPRED ccEEEEEEccccccccccEEccccHHHccccccccEEEEEccccccEEEEEEEEEccccccccccHHcccHHHHccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccEEEcccccccccHHHHHccccccccccccccHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHcccccEEEccHHHHHHHHHHccEEEEEcccccccccccccccHHHHHHHHHHccccccEEEEEccccHHHHHHHHcccccEEEcccccccccccccEEEEccHHHHcccccccccHHHHHHHHHHHHccccEEEEEcccccEEEEEEccccccHHccccccHHEEEccccEEEEEcccccccHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccEEEEcccccccHHHHHHHHHHHHcccccEEEEccEEEccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEEccccHHHHHHHHHccHHHHHHHHHHHHHHcccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHcccccEEEcccccHHHHHcccEEEEEEEEcccHHHHHHHHHHHHHHHccccccccEEEEEcccHHHc //