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Streptococcus pneumoniae G54 (spne4)
Gene : ACF56042.1
DDBJ      :             IS3-Spn1, transposase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  40/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:171 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  54->154 1pdnC_ a.4.1.5 * 0.00079 26.6 %
:RPS:PFM   54->103 PF01527 * Transposase_8 3e-04 42.9 %
:HMM:PFM   54->136 PF01527 * Transposase_8 8.8e-11 28.8 66/76  
:HMM:PFM   17->39 PF05225 * HTH_psq 0.001 39.1 23/45  
:BLT:SWISS 28->146 YI9A_ECOLX 2e-05 23.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF56042.1 GT:GENE ACF56042.1 GT:PRODUCT IS3-Spn1, transposase GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(351409..351924) GB:FROM 351409 GB:TO 351924 GB:DIRECTION - GB:PRODUCT IS3-Spn1, transposase GB:NOTE identified by match to protein family HMM PF01527 GB:PROTEIN_ID ACF56042.1 GB:DB_XREF GI:194357594 LENGTH 171 SQ:AASEQ MKLTYDDKVQIYELRKQGYSLEKLSNKFGINNSNLRYMIKLIDRYGIEFVKKGKNRYYSPDLKQEMINKVLYEGWTKDRVSLEYGLPSRTILLNWLAQYRKNGYTIVEKTRGRVPKMRRKPKKRPEERTELERLQAENEYLRAEKAILKKLRELRLKEEKEKEERQKLFKN GT:EXON 1|1-171:0| BL:SWS:NREP 1 BL:SWS:REP 28->146|YI9A_ECOLX|2e-05|23.5|119/173| SEG 111->133|rgrvpkmrrkpkkrpeerteler| SEG 148->168|lkklrelrlkeekekeerqkl| RP:PFM:NREP 1 RP:PFM:REP 54->103|PF01527|3e-04|42.9|49/78|Transposase_8| HM:PFM:NREP 2 HM:PFM:REP 54->136|PF01527|8.8e-11|28.8|66/76|Transposase_8| HM:PFM:REP 17->39|PF05225|0.001|39.1|23/45|HTH_psq| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF01527|IPR002514| GO:PFM GO:0004803|"GO:transposase activity"|PF01527|IPR002514| GO:PFM GO:0006313|"GO:transposition, DNA-mediated"|PF01527|IPR002514| HM:SCP:REP 54->154|1pdnC_|0.00079|26.6|94/0|a.4.1.5|2/2|Homeodomain-like| OP:NHOMO 179 OP:NHOMOORG 40 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------7-------51---------------22-39m6-521624646124421112222122122--766----------------------------------------------------7--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,105-136,153-172| PSIPRED ccccHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHccccccccHHHHHHHHHHHHHccccHHHHHHHHccccccHHHHHHHHHHHccccccccccccccccccccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //