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Streptococcus pneumoniae G54 (spne4)
Gene : ACF56044.1
DDBJ      :             helicase, putative
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  193/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:432 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   94->396 1gm5A PDBj 2e-09 29.0 %
:RPS:PDB   94->400 1cu1A PDBj 7e-14 15.6 %
:RPS:SCOP  64->210 1gm5A3  c.37.1.19 * 4e-13 23.8 %
:RPS:SCOP  306->428 2eyqA5  c.37.1.19 * 2e-18 26.2 %
:HMM:SCOP  106->411 2bmfA2 c.37.1.14 * 5e-30 21.5 %
:RPS:PFM   338->397 PF00271 * Helicase_C 4e-06 39.7 %
:HMM:PFM   337->396 PF00271 * Helicase_C 9.6e-13 31.0 58/78  
:HMM:PFM   96->244 PF00270 * DEAD 1.3e-08 20.7 145/167  
:BLT:SWISS 35->430 COMFA_BACSU 1e-72 39.1 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF56044.1 GT:GENE ACF56044.1 GT:PRODUCT helicase, putative GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(2046478..2047776) GB:FROM 2046478 GB:TO 2047776 GB:DIRECTION - GB:PRODUCT helicase, putative GB:NOTE identified by match to protein family HMM PF00271; match to protein family HMM PF04851 GB:PROTEIN_ID ACF56044.1 GB:DB_XREF GI:194357596 LENGTH 432 SQ:AASEQ MKVNLDYLGRLFTENELTEEERQLAEKLPAMRKEKGKLFCQRCNSTILEEWYLPIGAYYCRECLLMKRVRSDQTLYYFPQEDFPKQDVLKWRGQLTPFQEKVSEGLLQAVDKQKPTLVHAVTGAGKTEMIYQVVAKVINAGGAVCLASPRIDVCLELYKRLQQDFSCGIALLHGESEPYFRTPLVVATTHQLLKFYQAFDLLIVDEVDAFPYVDNPTLYHAVKNSVKENGLRIFLTATSTNELDKKVRLGELKRLSLPRRFHGNPLIIPKPIWLSDFNRYLDKNRLSPKLKSYIEKQRKTAYPLLIFASEIKKGEQLEEILQEQFPNEKIGFVSSVTEDRLEQVQAFRDGELTILISTTILERGVTFPCVDVFVVEANHRLFTKSSLIQIGGRVGRSMDRPTGDLLFFHDGLNASIKKAIKEIQMMNKEAGL GT:EXON 1|1-432:0| BL:SWS:NREP 1 BL:SWS:REP 35->430|COMFA_BACSU|1e-72|39.1|394/463| BL:PDB:NREP 1 BL:PDB:REP 94->396|1gm5A|2e-09|29.0|272/729| RP:PDB:NREP 1 RP:PDB:REP 94->400|1cu1A|7e-14|15.6|276/645| RP:PFM:NREP 1 RP:PFM:REP 338->397|PF00271|4e-06|39.7|58/76|Helicase_C| HM:PFM:NREP 2 HM:PFM:REP 337->396|PF00271|9.6e-13|31.0|58/78|Helicase_C| HM:PFM:REP 96->244|PF00270|1.3e-08|20.7|145/167|DEAD| GO:PFM:NREP 3 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00271|IPR001650| GO:PFM GO:0004386|"GO:helicase activity"|PF00271|IPR001650| GO:PFM GO:0005524|"GO:ATP binding"|PF00271|IPR001650| RP:SCP:NREP 2 RP:SCP:REP 64->210|1gm5A3|4e-13|23.8|147/259|c.37.1.19| RP:SCP:REP 306->428|2eyqA5|2e-18|26.2|122/211|c.37.1.19| HM:SCP:REP 106->411|2bmfA2|5e-30|21.5|274/0|c.37.1.14|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 228 OP:NHOMOORG 193 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------111----11--1-----11-111-----------------1-1-----------------11-1----11---------1------1-111-1--1-1-----1--112111111111111111223322111111121112211111211111111111111222211112111121211111112111-1-111111-12112221222122211211111111111111111111-------------------------------2-22----11-111----1------------------------1-------------------------------------------------------------------111-1111-------------------------------------------------------------------------------------1111111----------------------1--1-1--------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------11----------1----------------1111---1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 337 STR:RPRED 78.0 SQ:SECSTR #############################################################################################cccccccccHHHccccccccEEEEEEccccccTTTHHHHHHHHHTTTccEEEEEEccHHHHHHHHHHHHHHTccccEEEcccccccccccEEEEEHHHHHccTTcccEEEEETTTHHHHHHHHHHHcccHHHHHHHHHHHcTTccccccccHHTTTTTccEEEEEEcccTTccccccTTcEEEEEccccccEEETTEEEcGGGTccTccEEEEEccccHHHHHHHHHHHHTTccEEEEcTTcccccccccccEEEEEcTTHHHHccccccEEEEccEEEEEEEccccccEEEEEEEEccHHHHHHHHHHHHHHHcHHHHHHTTTcccccHHHHHHHE## DISOP:02AL 1-3,21-30,428-433| PSIPRED ccccHHHccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHccccccHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHHcccEEEEEccccHHHcccEEEEccHHHHHHHHHccEEEEEcHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHcccEEEEcccccccccccEEEEEEEEEcHHHHHHHHccHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHcccccEEEEHHHHHHccccccccEEEEccccccccHHHHHHHHHHcccccccccEEEEEEcccccHHHHHHHHHHHHHHHHccc //