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Streptococcus pneumoniae G54 (spne4)
Gene : ACF56083.1
DDBJ      :             YlmE protein
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  788/915 : Eukaryota  158/199 : Viruses  0/175   --->[See Alignment]
c.1.6
:223 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   49->222 1b54A PDBj 4e-19 37.4 %
:RPS:PDB   2->222 3cpgA PDBj 2e-33 31.9 %
:RPS:SCOP  3->222 1b54A  c.1.6.2 * 1e-26 31.4 %
:HMM:SCOP  1->223 1ct5A_ c.1.6.2 * 4.8e-70 45.7 %
:RPS:PFM   49->222 PF01168 * Ala_racemase_N 1e-16 31.9 %
:HMM:PFM   21->222 PF01168 * Ala_racemase_N 1.8e-30 27.6 174/214  
:BLT:SWISS 1->220 YLME_BACSU 6e-49 42.9 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF56083.1 GT:GENE ACF56083.1 GT:PRODUCT YlmE protein GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(1514982..1515653) GB:FROM 1514982 GB:TO 1515653 GB:DIRECTION - GB:PRODUCT YlmE protein GB:NOTE identified by match to protein family HMM TIGR00044 GB:PROTEIN_ID ACF56083.1 GB:DB_XREF GI:194357635 LENGTH 223 SQ:AASEQ MNVKENTELVFREVAEASLSAHRESGSVSVIAVTKYVDVPTAEALLPLGVHHIGENRVDKFLEKYEALKDRDVTWHLIGTLQRRKVKDVIQYVDYFHALDSVKLAGEIQKRSDRVIKCFLQVNISKEESKHGFSREELLEILPELARLDKIEYVGLMTMAPFEASSEQLKEIFKAAQDLQREIQEKQIPNMPMTELSMGMSRDYKEAIQFGSTFVRIGTSFFK GT:EXON 1|1-223:0| BL:SWS:NREP 1 BL:SWS:REP 1->220|YLME_BACSU|6e-49|42.9|219/230| BL:PDB:NREP 1 BL:PDB:REP 49->222|1b54A|4e-19|37.4|163/230| RP:PDB:NREP 1 RP:PDB:REP 2->222|3cpgA|2e-33|31.9|216/247| RP:PFM:NREP 1 RP:PFM:REP 49->222|PF01168|1e-16|31.9|163/211|Ala_racemase_N| HM:PFM:NREP 1 HM:PFM:REP 21->222|PF01168|1.8e-30|27.6|174/214|Ala_racemase_N| RP:SCP:NREP 1 RP:SCP:REP 3->222|1b54A|1e-26|31.4|207/230|c.1.6.2| HM:SCP:REP 1->223|1ct5A_|4.8e-70|45.7|219/0|c.1.6.2|1/1|PLP-binding barrel| OP:NHOMO 1013 OP:NHOMOORG 950 OP:PATTERN -------------------------------------------------1111--------------- 1111111111111111111-11111211111111-111111---111111111111-1--11-111111111111111111111111111111111---11211121211--------------1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111------------11--------1111111111111111111111111111111111111111111111111111111111111121111111111-11111111111111111111-11111111111111111111112121111111111112-11111111111111111111111111111111-1--111111111111--1-112-----------------------------111111222121111111111111111111111111112-1112111112111111212111111111111111111111111111111111111111111111-2111111111111111111111111111111111111111111111111111111111111--111111--11111211211111111111-11111111111111111111112211111111111111111111111111111111111111111--111111111111111111111111111111111111111111111111111111111111111111111111111111111111221111111111111111111111--------1-1-------------------------1111111111111 1-11111-3111-11111111111---------1111111-111--1-1111-1-11-1111111111-1111111111111111111-12-11-11111---111-1--1211112--1-11-21111241-111111121111-111111-1-11113421111-111-11311-11F1111121-11311111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 222 STR:RPRED 99.6 SQ:SECSTR #HHHHHHHHHHHHHHHHHHHTTccTTccEEEEEcTTccHHHHHHHHHTTccEEEEccHHHHHHHHHHHHHEEEcEEEcccccGGGHHHHTTTccEEEEEccHHHHHHHHHHHTccEEEEEEccccccTTcccccGGGHHHHHHHHHTcTTEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHccTTcTcTTccEEEcTTTHHHHHTTccEEEEcTTTcc PSIPRED ccHHHHHHHHHHHHHHHHHHccccccccEEEEEEccccHHHHHHHHHccccEEEccHHHHHHHHHHHccccccEEEEEccccHHHHHHHHccccEEEEEccHHHHHHHHHHccccccEEEEEEcccccccccccHHHHHHHHHHHHHccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEccccHHHHHHHHccccEEEEEHHHcc //