[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptococcus pneumoniae G54 (spne4)
Gene : ACF56125.1
DDBJ      :             elongation factor Tu family protein
Swiss-Prot:             

Homologs  Archaea  21/68 : Bacteria  838/915 : Eukaryota  39/199 : Viruses  0/175   --->[See Alignment]
b.43.3d.58.11
:359 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   53->340 3e3xA PDBj 6e-67 59.5 %
:RPS:PDB   53->344 3e3xA PDBj 2e-54 53.3 %
:RPS:SCOP  1->50 1wdtA1  b.43.3.1 * 2e-05 22.0 %
:RPS:SCOP  53->138 1fnmA4  d.58.11.1 * 6e-15 26.0 %
:RPS:SCOP  149->258 1n0uA5  d.58.11.1 * 8e-26 17.8 %
:HMM:SCOP  2->53 2bv3A1 b.43.3.1 * 1.7e-08 44.2 %
:HMM:SCOP  53->138 1wdtA5 d.58.11.1 * 2.4e-19 39.0 %
:HMM:SCOP  149->265 1n0uA5 d.58.11.1 * 1e-32 40.5 %
:RPS:PFM   149->230 PF00679 * EFG_C 4e-11 42.0 %
:HMM:PFM   148->225 PF00679 * EFG_C 5.7e-27 43.6 78/89  
:HMM:PFM   8->40 PF03144 * GTP_EFTU_D2 0.00014 39.4 33/74  
:BLT:SWISS 6->343 TYPA_BACSU e-144 72.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF56125.1 GT:GENE ACF56125.1 GT:PRODUCT elongation factor Tu family protein GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 615753..616832 GB:FROM 615753 GB:TO 616832 GB:DIRECTION + GB:PRODUCT elongation factor Tu family protein GB:NOTE contains potential frameshift; identified by match to protein family HMM PF00679 GB:PROTEIN_ID ACF56125.1 GB:DB_XREF GI:194357677 LENGTH 359 SQ:AASEQ MLQNXFGFFGLERREIQEAKAGDLIAVSGMEDIFVGETITPTDAVEALPILHIDEPTLQMTFLVNNSPFAGKEGKWVTSRKVEERLQAELQTDVSLRVDPTDSPDKWTVSGRGELHLSILIETMRREGYELQVSRPEVIVKEIDGVKCEPFERVQIDTPEEYQGSVIQSLSERKGEMLDMISTGNGQTRLVFLVPARGLIGYSTEFLSMTRGYGIMNHTFDQYLPLIPGEIGGRHRGALVSIDAGKATTYSIMSIEERGTIFVNPGTEVYEGMIIGENSRENDLTVNITKAKQMTNVRSATKDQTAVIKTPRILTLEESLEFLNDDEYMEVTPESIRLRKQILNKAEREKANKKKKSAE GT:EXON 1|1-359:0| BL:SWS:NREP 1 BL:SWS:REP 6->343|TYPA_BACSU|e-144|72.5|338/612| SEG 345->358|kaerekankkkksa| BL:PDB:NREP 1 BL:PDB:REP 53->340|3e3xA|6e-67|59.5|257/267| RP:PDB:NREP 1 RP:PDB:REP 53->344|3e3xA|2e-54|53.3|261/267| RP:PFM:NREP 1 RP:PFM:REP 149->230|PF00679|4e-11|42.0|81/88|EFG_C| HM:PFM:NREP 2 HM:PFM:REP 148->225|PF00679|5.7e-27|43.6|78/89|EFG_C| HM:PFM:REP 8->40|PF03144|0.00014|39.4|33/74|GTP_EFTU_D2| GO:PFM:NREP 1 GO:PFM GO:0005525|"GO:GTP binding"|PF00679|IPR000640| RP:SCP:NREP 3 RP:SCP:REP 1->50|1wdtA1|2e-05|22.0|50/103|b.43.3.1| RP:SCP:REP 53->138|1fnmA4|6e-15|26.0|77/79|d.58.11.1| RP:SCP:REP 149->258|1n0uA5|8e-26|17.8|107/114|d.58.11.1| HM:SCP:REP 2->53|2bv3A1|1.7e-08|44.2|52/0|b.43.3.1|1/1|Translation proteins| HM:SCP:REP 53->138|1wdtA5|2.4e-19|39.0|77/0|d.58.11.1|1/1|EF-G C-terminal domain-like| HM:SCP:REP 149->265|1n0uA5|1e-32|40.5|116/0|d.58.11.1|1/1|EF-G C-terminal domain-like| OP:NHOMO 1444 OP:NHOMOORG 898 OP:PATTERN ------------------------11111111111--------11-11111111-------------- 1111211111111111111-11111111111111111111-11111111111111112112211111121111111111111--11221111-1111--11111111111--------------111111111111111211111-221133112321122123212111321222222222222211--111111111111111111111111111111121111111111111111111111111111111221111112111122111111122122222222222222222222222222222222222222222222211111111111121211221111111112111-111111-1-1111--111-2111132222111111111111111111111111-11111111221122212222222211211221111112111111111111112121111111111--2222222222222111212222233323333333332333333333333333333312333222223332222222212222222222222212112212212212211111111111111121112111111111111111111111211222221232222222222222222232222221-2112222122222222322222222222-2222222222222222222333222222222222222222222322222222-322222222222-1122222222223222221222222221222222222222222233333222233332222222222222122212222232222212222222222221221111111----------1----1---1--------1-------11--------111 11--11--311-111------------------------------------------------------------------------------111-----------111-----------------------------------------------------------------2242J332223245-323231112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 344 STR:RPRED 95.8 SQ:SECSTR cccEEEEEETTEEEEEcEEETTcEEEEccTTTccccEEEEccTTcccccccccccccEEEEEEccccTTTTcEcccccHHHHHHHHHHHHHHcTTcEEEEcccTTEEEEEEccHHHHHHHHHHHHHTTccEEEcccEEccEETTcEEEEEEEEEEEEEGGGHHHHHHHHHTcEEEEEEEEccHHccccEEEEEEEHHHHTTHHHHHHHHTTTccEEEEEEEEEEEccccccccccccEEEEcccEEccHHHHHHHTTcEEEcccTTcEEcTTTEEEEEcccccEEEccccccccccGccHHHHHHHHHHHHccccHHHHHHHccTTEEEEEccccEEEEEcccH############### DISOP:02AL 228-230,345-360| PSIPRED ccccEEEEEcccEEEccccccccEEEEEccccEEEccEEEccccccccccccccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHcccEEEEEEcccccEEEEEEccHHHHHHHHHHHHHccccEEEccHHHEEEcccccccccEEEEEEEEcHHHHHHHHHHHHHcccEEEEEEEccccEEEEEEEEcHHHcccHHHHHHHHHccEEEEEEEEcccccccccccccccccEEEEEccccEEEEEHHHHHHHccEEEccccEEEcccEEEEEcccccEEEEEEccccccEEEcccccEEEEEcccccccHHHHHHHccccEEEEEccccEEEEEHHccHHHHHHHHHHHHHcc //