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Streptococcus pneumoniae G54 (spne4)
Gene : ACF56386.1
DDBJ      :             ABC transporter,  permease protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  197/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.22.1
:318 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   226->314 2nq2B PDBj 9e-04 26.1 %
:RPS:SCOP  37->314 1l7vA  f.22.1.1 * 1e-15 18.5 %
:HMM:SCOP  3->315 1l7vA_ f.22.1.1 * 5.6e-41 29.2 %
:RPS:PFM   37->315 PF01032 * FecCD 4e-08 28.9 %
:HMM:PFM   33->314 PF01032 * FecCD 1.1e-45 28.3 276/311  
:BLT:SWISS 40->317 YCLO_BACSU 7e-38 32.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF56386.1 GT:GENE ACF56386.1 GT:PRODUCT ABC transporter, permease protein GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 1690416..1691372 GB:FROM 1690416 GB:TO 1691372 GB:DIRECTION + GB:PRODUCT ABC transporter, permease protein GB:NOTE identified by match to protein family HMM PF01032 GB:PROTEIN_ID ACF56386.1 GB:DB_XREF GI:194357938 LENGTH 318 SQ:AASEQ MQTKSKHTKLFWILIILAIGACLLYFWPITHLSAFAWKLRSQKIIVYLLVAIATGISTISFQTLTENRFLTPSILGIESFYVLLQTLLLVFESKFLQLGKSPILEFLVLLLVQSLFFLALQGYLKTLMKQDLVFILLICLALRSLFRNISTFLQVLMDPNEYDKLQNSLFASFQHLNTSILAIGSLIILALTIFFFRKAVVLDVLHLQRETAQILGLDVEKEQKELLWGIVLLTSTATALVGPMAFFGFMLANLTYLIVKDYQHKLLFIVAILVGFISLTLGQALIERVFALEIRISMIIESVGGFLFFILLYRRSRQ GT:EXON 1|1-318:0| BL:SWS:NREP 1 BL:SWS:REP 40->317|YCLO_BACSU|7e-38|32.1|277/315| TM:NTM 9 TM:REGION 10->32| TM:REGION 43->65| TM:REGION 72->94| TM:REGION 103->125| TM:REGION 134->156| TM:REGION 175->196| TM:REGION 232->254| TM:REGION 265->287| TM:REGION 292->313| SEG 13->24|iliilaigacll| SEG 104->121|leflvlllvqslfflalq| SEG 178->193|tsilaigsliilalti| BL:PDB:NREP 1 BL:PDB:REP 226->314|2nq2B|9e-04|26.1|88/300| RP:PFM:NREP 1 RP:PFM:REP 37->315|PF01032|4e-08|28.9|270/313|FecCD| HM:PFM:NREP 1 HM:PFM:REP 33->314|PF01032|1.1e-45|28.3|276/311|FecCD| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF01032|IPR000522| GO:PFM GO:0006810|"GO:transport"|PF01032|IPR000522| GO:PFM GO:0016020|"GO:membrane"|PF01032|IPR000522| RP:SCP:NREP 1 RP:SCP:REP 37->314|1l7vA|1e-15|18.5|270/324|f.22.1.1| HM:SCP:REP 3->315|1l7vA_|5.6e-41|29.2|305/324|f.22.1.1|1/1|ABC transporter involved in vitamin B12 uptake, BtuC| OP:NHOMO 201 OP:NHOMOORG 197 OP:PATTERN -------------------------------------------------------------------- -----1-11111-1------------------------------1-111---11-11---1----1-------------------------------------------------------------------------------------------------------------------------------1111111111111111111111111--11211------2-111111111111111111111-------------------------111-----1111111111111----------------111-----1---111111111211------1--1-1----11--------------1-------11-11--------1--1-11111111111--------------11----------------11111------------------------------------------------------1------------------------------------------1--------------1111111----------------------------------1--------1111-------------------11----------11-------1----1-------------------------------------------------------11--1--------------------------111111111111-----------------1111111---------11111---11------1----1------------------11-1111121111----------------------------------1---------------------------1---------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 88 STR:RPRED 27.7 SQ:SECSTR #################################################################################################################################################################################################################################HHHHHHHHHHHHHHHHccccccTTTHHHHHHHHH#cccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHTc#### DISOP:02AL 1-6,8-9,317-319| PSIPRED ccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccHHcHHHccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHcHHHHHHHHHHHHHHHHHHHHHccc //