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Streptococcus pneumoniae G54 (spne4)
Gene : ACF56493.1
DDBJ      :             IS3-Spn1, transposase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  154/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.55.3
:117 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:SCOP  43->116 1b92A  c.55.3.2 * 2e-04 11.8 %
:HMM:SCOP  34->108 1c0mA2 c.55.3.2 * 0.00025 30.6 %
:HMM:PFM   39->108 PF00665 * rve 7.4e-10 31.4 70/120  
:HMM:PFM   9->44 PF00241 * Cofilin_ADF 0.00027 20.0 35/127  
:BLT:SWISS 1->96 INSK_ECOLI 4e-20 48.4 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF56493.1 GT:GENE ACF56493.1 GT:PRODUCT IS3-Spn1, transposase GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(350834..351187) GB:FROM 350834 GB:TO 351187 GB:DIRECTION - GB:PRODUCT IS3-Spn1, transposase GB:PROTEIN_ID ACF56493.1 GB:DB_XREF GI:194358045 LENGTH 117 SQ:AASEQ MIKVLNLQAKMRQKRKYSSHKGDVGKKAENLIQGQFEGSKTMEKCYTDVTEFAIPASTQKLYLSPVLDGFNSEIIAYNLSTSPNLEQVQTMLEQAFTEKHYGGVLLWDSEIGNVLWL GT:EXON 1|1-117:0| BL:SWS:NREP 1 BL:SWS:REP 1->96|INSK_ECOLI|4e-20|48.4|93/283| HM:PFM:NREP 2 HM:PFM:REP 39->108|PF00665|7.4e-10|31.4|70/120|rve| HM:PFM:REP 9->44|PF00241|0.00027|20.0|35/127|Cofilin_ADF| RP:SCP:NREP 1 RP:SCP:REP 43->116|1b92A|2e-04|11.8|68/144|c.55.3.2| HM:SCP:REP 34->108|1c0mA2|0.00025|30.6|72/0|c.55.3.2|1/1|Ribonuclease H-like| OP:NHOMO 599 OP:NHOMOORG 155 OP:PATTERN -------------------------------------------------------------------- ------6----4-2----------------------------------------------------4----3---13-1--4---------------------------------------------------------------------------------------------------------------------521-12-334--------1-3-2--------2--1--------------------5--4--3-6-------3----179-22-49i6-5215-5454353221112222122142--876--------1------------------3---2--1-----------------7------------------------------------1-----------1--33--------1----------------------------------------------------------------------42--D25-----FE----1----22---2-2--4---1-112---2--------22-111-----------------------------------------------------------------1----------------------------------21--------------1--21162-1---1-211-N--1576155-514--7---------------------13221--388739887-3-------------------477-----12-1----------384----------------6-9------------------------43-------------------------------------------3------C-------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 57 STR:RPRED 48.7 SQ:SECSTR ##########################################cEEEEEEEE##cGGGTTccEEEEEEETTTccEEEEEEccccHHHHHHHHHHHHHHHccc################ DISOP:02AL 5-5,7-7| PSIPRED cHHHcccEEEEcccccccccccccccccccHHcccccccccccEEEEccEEEEEEccccEEEEEEEEccccccEEEEEEcccccHHHHHHHHHHHHHHccccccEEEEccccccccc //