[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptococcus pneumoniae G54 (spne4)
Gene : ACF56564.1
DDBJ      :             ABC transporter, permease protein
Swiss-Prot:             

Homologs  Archaea  32/68 : Bacteria  574/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:281 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   70->277 2r6gG PDBj 2e-19 25.5 %
:RPS:PDB   168->206 3dhwA PDBj 1e-08 23.1 %
:RPS:SCOP  26->277 2r6gG1  f.58.1.1 * 2e-20 20.6 %
:RPS:PFM   134->215 PF00528 * BPD_transp_1 3e-07 32.9 %
:HMM:PFM   96->273 PF00528 * BPD_transp_1 4.6e-23 20.0 175/185  
:BLT:SWISS 76->273 UGPE_YERE8 1e-31 32.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF56564.1 GT:GENE ACF56564.1 GT:PRODUCT ABC transporter, permease protein GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(1621767..1622612) GB:FROM 1621767 GB:TO 1622612 GB:DIRECTION - GB:PRODUCT ABC transporter, permease protein GB:NOTE identified by match to protein family HMM PF00528 GB:PROTEIN_ID ACF56564.1 GB:DB_XREF GI:194358116 LENGTH 281 SQ:AASEQ MKRFKPTTILEYILLTLLAGLFLFPMVWMVVSAMKPEADVYKNLTSWQAFLPSLNPADWFKPYQEVFERFSIFTYLGNSIFYAGTFAIGSIIVNALAGFAFAKVNFSGKKILFGFLLALLIIPVETVLIPQFTIINSLGLVNNRLAVIIPGLASVFNIYLFRNFFIAIPEEILESAKMDGASIVRIFFRIMLPMSKPAVATVGVLSFISSWNDYIWPLMVLTDSSKFSMQVAITTINTTQPVYINQVMAVLTISTIPLILVYVVAQKYIVQGLGGSGTGIK GT:EXON 1|1-281:0| BL:SWS:NREP 1 BL:SWS:REP 76->273|UGPE_YERE8|1e-31|32.3|198/281| TM:NTM 6 TM:REGION 11->33| TM:REGION 78->100| TM:REGION 113->135| TM:REGION 147->169| TM:REGION 199->221| TM:REGION 243->265| SEG 7->23|ttileyilltllaglfl| SEG 108->121|gkkilfgfllalli| BL:PDB:NREP 1 BL:PDB:REP 70->277|2r6gG|2e-19|25.5|208/284| RP:PDB:NREP 1 RP:PDB:REP 168->206|3dhwA|1e-08|23.1|39/203| RP:PFM:NREP 1 RP:PFM:REP 134->215|PF00528|3e-07|32.9|82/195|BPD_transp_1| HM:PFM:NREP 1 HM:PFM:REP 96->273|PF00528|4.6e-23|20.0|175/185|BPD_transp_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 1 RP:SCP:REP 26->277|2r6gG1|2e-20|20.6|252/284|f.58.1.1| OP:NHOMO 3239 OP:NHOMOORG 610 OP:PATTERN 22--3--2-1111111712221--81161-4-----------------------23421-1322---- ---1m213334-1123344-423349444443255514565437L*b2DIG3RKM12B--977BI4EQZH68666GDA1---4-------------------------1---------------------------9BB67---65221311-11221122212221333--1-----1----DE244EF-953222222331132223SI994822354A29457787779*111111111111111-1---5411221-22233--22---1-42552325344422666777766664333344443333355---5553G4-2B1111121514D2--1445g-26233F--231--1J--1786J2-1-------111112-DA91--435534477477677D---6--4-19P--XWWJaWQnjbVQ22---9H98768E85--------3112--11-----------------------------2---2-144436776665233344894443335562223--2237-23342668B----1--3--------------1-2--111--11111---------222224----------1------------------125-----1-6----------------------1---------26881413333333333-33333334333323333325656611123222222222222226-1133321-488888888888---------11111-86D---111-----1--1----------1-22222233422233545----------1222222223154411111111111111-------------------1811111-11-12111111--121---7LFB89R8B9-2- -------------2------------------------------------------------------------------------------------------------------------------------------------------------2--------------------------1--------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 208 STR:RPRED 74.0 SQ:SECSTR #####################################################################ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccTTcHHHHHHHHHTTccccccHHHHHHHHHHHHHHTTcHHHHHHHHTTTTHHHHHHHHHHTTccTTTTTHHHHHTccTHHHHHHTTHHHHHHHHHHHHHHHHHHHHTccHHHHHHcccGGGccHHHHGGGGcccccccHHHHHHHHHHTHHHHHHHHHHHTTTccccccTTT#### DISOP:02AL 1-3,279-282| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc //