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Streptococcus pneumoniae G54 (spne4)
Gene : ACF56569.1
DDBJ      :             ABC transporter substrate binding protein
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  257/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.92.2
:321 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   44->321 2chuB PDBj 1e-52 43.0 %
:RPS:PDB   38->321 2chuB PDBj 6e-45 40.2 %
:RPS:SCOP  38->321 2chuA1  c.92.2.4 * 7e-50 40.4 %
:HMM:SCOP  31->305 2chuA1 c.92.2.4 * 2.5e-57 33.0 %
:RPS:PFM   60->294 PF01497 * Peripla_BP_2 5e-15 32.0 %
:HMM:PFM   60->296 PF01497 * Peripla_BP_2 2.5e-38 26.6 229/238  
:BLT:SWISS 41->321 YCLQ_BACSU 7e-52 38.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF56569.1 GT:GENE ACF56569.1 GT:PRODUCT ABC transporter substrate binding protein GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 1692217..1693182 GB:FROM 1692217 GB:TO 1693182 GB:DIRECTION + GB:PRODUCT ABC transporter substrate binding protein GB:NOTE identified by match to protein family HMM PF01497 GB:PROTEIN_ID ACF56569.1 GB:DB_XREF GI:194358121 LENGTH 321 SQ:AASEQ MKTSLKLYFTALVASFLLLLGACSTNSSTSQTETSSSAPTEVTIKSSLDEVKLSKVPEKIVTFDLGAADTIRALGFEKNIVGMPTKTVPTYLKDLVGTVKNVGSMKEPDLEAIAALEPDLIIASPRTQKFVDKFKEIAPTVLFQASKDDYWTSTKANIESLASAFGETGTQKAKEELAKLDKSIQEVATKNESSDKKALAILLNEGKMAAFGAKSRFSFLYQTLKFKPTDTTFEDSRHGQEVSFESVKEINPDILFVINRTLAIGGDNSSNDGVLENALIAETPAAKNGKIIQLTPDLWYLSGGGLESTKLMIEDIQKALK GT:EXON 1|1-321:0| BL:SWS:NREP 1 BL:SWS:REP 41->321|YCLQ_BACSU|7e-52|38.8|278/317| TM:NTM 1 TM:REGION 5->25| SEG 24->37|stnsstsqtetsss| BL:PDB:NREP 1 BL:PDB:REP 44->321|2chuB|1e-52|43.0|270/283| RP:PDB:NREP 1 RP:PDB:REP 38->321|2chuB|6e-45|40.2|276/283| RP:PFM:NREP 1 RP:PFM:REP 60->294|PF01497|5e-15|32.0|225/235|Peripla_BP_2| HM:PFM:NREP 1 HM:PFM:REP 60->296|PF01497|2.5e-38|26.6|229/238|Peripla_BP_2| GO:PFM:NREP 2 GO:PFM GO:0005381|"GO:iron ion transmembrane transporter activity"|PF01497|IPR002491| GO:PFM GO:0006827|"GO:high-affinity iron ion transport"|PF01497|IPR002491| RP:SCP:NREP 1 RP:SCP:REP 38->321|2chuA1|7e-50|40.4|275/283|c.92.2.4| HM:SCP:REP 31->305|2chuA1|2.5e-57|33.0|270/0|c.92.2.4|1/1|"Helical backbone" metal receptor| OP:NHOMO 523 OP:NHOMOORG 264 OP:PATTERN -----------------------------------------------1------111-1-1------- -----22155631211111-1-111-111111-----332------111---21-11---1---111-16------------1----------------------1--------------------------------------1-5-11-------------21---2--------------1--------227777776727677873344367771334221------96133333323333333323432-------------------------111-----1111111111111----------------111-----1-11222222213222--12122-11-1----11--------11----1-------11-11--------1--1-11111111111--------------221------1--------11111------------------------------------------------------1------------------------------------------1-1------------2222222----------------------------------2-----11-1-12------------------121-2--------11-------1-1--1---------------1---------------------------------------12112------------------------1-111111111111---------------214111121--------111111---21------1----1------------------2211111133211----------------------------------1-------------------------------------1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 284 STR:RPRED 88.5 SQ:SECSTR #####################################cccEEEEEccccEEEEEcccccEEEccHHHHHHHHHTTcGGGEEEccGGGccGGGGGGTTccccccccccccHHHHHHTcccEEEEcTTTGGGHHHHHTTccEEEccccTTcHHHHHHHHHHHHHHTTTcHTHHHHHHHHHHHHHHHHHHHHTcccTTcEEEEEEEETTEEEEEcTTcTTTHHHHTTccEEcccccccccccEEEcHHHHHHHcccEEEEEEHHHHHTcccHcHHHHTccHHHHHcHHHHTTcEEEEcHHHHTTTTccHHHHHHHHHHHHHHHc DISOP:02AL 1-3,23-41| PSIPRED ccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEcccEEEEcccccEEEEEcHHHHHHHHHccccccEEEEEcccccHHHHHHHcccccccccccccHHHHHHccccEEEEccccHHHHHHHHHHccEEEEcccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccEEEEEccccHHHHHHHHHcccccccccccccccccccHHHHHHHcccEEEEEEccccccccHHHHHHHHccHHHHccHHHHcccEEEEccHHHHcccccHHHHHHHHHHHHHHHc //