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Streptococcus pneumoniae G54 (spne4)
Gene : ACF56609.1
DDBJ      :             Tn5253 TraG protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  153/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:625 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   93->582 1e9rB PDBj 3e-31 17.0 %
:RPS:SCOP  137->282 1rkbA  c.37.1.1 * 1e-04 14.4 %
:RPS:SCOP  435->582 1e9rA  c.37.1.11 * 5e-24 23.1 %
:HMM:SCOP  80->567 1e9rA_ c.37.1.11 * 4.1e-45 24.1 %
:RPS:PFM   139->573 PF02534 * TraG 2e-57 39.3 %
:HMM:PFM   134->574 PF02534 * TraG 2.1e-69 28.2 397/469  
:BLT:SWISS 143->568 TRAG_RHISN 1e-10 22.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF56609.1 GT:GENE ACF56609.1 GT:PRODUCT Tn5253 TraG protein GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(1246395..1248272) GB:FROM 1246395 GB:TO 1248272 GB:DIRECTION - GB:PRODUCT Tn5253 TraG protein GB:NOTE identified by match to protein family HMM PF02534 GB:PROTEIN_ID ACF56609.1 GB:DB_XREF GI:194358161 LENGTH 625 SQ:AASEQ MYSGKKFILFSLLGILLGYLFHRLTLLYDSYTGNTLDKWIHLLMEGQDEVLQSPWNVSFTGKSSAFFLLGFVMMLLVYLYLETGKKQYREGVEYGSARFGTLKEKKLFYGKEFLHDTILAQDVRLTLLDKKPPQYDRNKNIAVIGGSGSGKTFRFVKPNLIQMNSSNIVVDPKDHLAEKTGKLFLEHGYQVKVLDLVNMKNSDGFNPFRYIETENDLNRMLTVYFNNTKGSGSRSDPFWDEASMTLVRALASYLVDFYNPPKTREQLIEESRLSQKEYKNLLKRQKKEVEERKKRGRYPSFAEISKLIKHLSKGENQEKSVLEILFENYAKKYGTENFTMRNWADFQNYKDKTLDSVIAVTTAKFALFNIQSVMDLTKRDTLDMKTWGKEKSMVYLVIPDNDSTFRFLSALFFSTVFQTLTRQADIDFKGQLPLHVRVYLDEFANIGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLYKEKEAWKTILGNCDSLVYLGGNDEDTFKFMSGLLGKQTIDVRNTSRSFGQTGSGSLSHQKIARDLMTPDEVGNMKRHECLVRIANMPVFKSKKYNSTKHPNWRYLANQESDERWWNYQINPLNQNQENHLEGLRIRDLTFESSLK GT:EXON 1|1-625:0| BL:SWS:NREP 1 BL:SWS:REP 143->568|TRAG_RHISN|1e-10|22.8|373/640| TM:NTM 2 TM:REGION 7->29| TM:REGION 64->82| SEG 7->21|filfsllgillgylf| SEG 67->81|fllgfvmmllvylyl| SEG 283->295|krqkkeveerkkr| RP:PDB:NREP 1 RP:PDB:REP 93->582|1e9rB|3e-31|17.0|405/422| RP:PFM:NREP 1 RP:PFM:REP 139->573|PF02534|2e-57|39.3|392/431|TraG| HM:PFM:NREP 1 HM:PFM:REP 134->574|PF02534|2.1e-69|28.2|397/469|TraG| GO:PFM:NREP 2 GO:PFM GO:0009291|"GO:unidirectional conjugation"|PF02534|IPR003688| GO:PFM GO:0016020|"GO:membrane"|PF02534|IPR003688| RP:SCP:NREP 2 RP:SCP:REP 137->282|1rkbA|1e-04|14.4|146/173|c.37.1.1| RP:SCP:REP 435->582|1e9rA|5e-24|23.1|134/420|c.37.1.11| HM:SCP:REP 80->567|1e9rA_|4.1e-45|24.1|406/433|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 203 OP:NHOMOORG 153 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------1----------------------------32-------------------------------------------------------------------------------------------------------------------------------------1----1------------1--------1----------2-1---------1-----1------1--51---------11111--1--------11----11---2-1-1-11-1-11-2111-2322-1-----12--6112-421----1-112--1---3--2---------3--1-1--1----------2-----1-1-113-1112---2211-131----2----1-----------12-----11111111111111111111111111111--121-------11-11-----111---------3---1-------11-21----------1----------21-------1----------------------------------1--1----1-1-1-----12-------------------1-------------------------------------------------------------------1----------------------------------------1------111-----------------------------------1-------------------------1--------------12121----------------------------------1-1----------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 475 STR:RPRED 76.0 SQ:SECSTR #########################################################################################cccTcccccccEEEEEccEEcHHHHHHHHcccccccEETTEEccGGGGGGcEEEEccTTccHHHHHHHHHHHHTTcEEEEEEETTHHHHHHTHHHHHHccTTcEEEcTTcTTcccccGGGGcccTTHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHTccHHHHHHHH################TTcTTTTTTcccHHHHHHHHHHHHHHHHHcHHHHHcccccccHHHHHHcTTcccHHHHHHHHHHHHHcHHHHHcccccccHHHHHHcTTcccGccEEEEEcGGGHHHHHHHHHHHHHHHHHHGGGccccTTcTcTTccEEEEEccGGGccccccHHHHHHHcTTTTEEEEEEEccHHHHHHHHccHHHHHHHHTTccEEEEcccTcHHHHHHHHHHHcEEEEEEEcccEEc######ccEEEEEEEEcccHHHHHTccccEEEEEccccccEEEEEccccccccccccc####################################### DISOP:02AL 1-3,90-94,102-102,106-110,426-427,519-544,602-609,623-623,625-626| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHccccccccccccccEEEccccccccccccEEEEEEcccccccHHHHHHHHHHcccccEEEEcccHHHHHHHHHHHHHcccEEEEEccccccccccccHHHHcccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccHHHHHHHccccccHHHHHHcccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEcccccccHHHHHHHHHHHccccEEEEEEEccHHHHHHHHccHHHHHHHHHHccEEEEEccccHHHHHHHHHHHccEEEEEEEEEEEccccccccEEEEEEEEccccHHHHHHccccEEEEEEcccccEEEccccccccHHHHHHHcccccccccccccccccccccccccccccccccHHHccc //