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Streptococcus pneumoniae G54 (spne4)
Gene : ACF56645.1
DDBJ      :             ABC transporter, permease protein
Swiss-Prot:             

Homologs  Archaea  37/68 : Bacteria  572/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:277 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   101->277 2r6gG PDBj 4e-20 30.9 %
:RPS:PDB   166->204 3dhwA PDBj 2e-10 41.0 %
:RPS:SCOP  12->277 2r6gG1  f.58.1.1 * 2e-26 24.0 %
:RPS:PFM   134->218 PF00528 * BPD_transp_1 3e-09 31.8 %
:HMM:PFM   87->270 PF00528 * BPD_transp_1 1.1e-21 23.0 178/185  
:BLT:SWISS 22->277 YCJP_ECOLI 6e-36 34.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF56645.1 GT:GENE ACF56645.1 GT:PRODUCT ABC transporter, permease protein GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(1539480..1540313) GB:FROM 1539480 GB:TO 1540313 GB:DIRECTION - GB:PRODUCT ABC transporter, permease protein GB:NOTE identified by match to protein family HMM PF00528 GB:PROTEIN_ID ACF56645.1 GB:DB_XREF GI:194358197 LENGTH 277 SQ:AASEQ MKKKSSIYLDILSHVLLVGATIVAIFPLVWIIISSVKGKGELTQYPTRFWPEQFTLDYFTHVINDLHFIDNIRNSLIIALATTLIAIIISAMAAYGIVRFFPKLGAIMSRLLVITYIFPPILLAIPYSIAIAKVGLTNSLFGLMMVYLSFSVPYAVWLLVGFFQTVPIGIEEAARIDGANKFVTFYKVVLPIVAPGIVATAIYTFINAWNEFLYALILINNTGKMTVAVALRSLNGSEILDWGDMMAASVIVVLPSIIFFSIIQNKIASGLSEGSVK GT:EXON 1|1-277:0| BL:SWS:NREP 1 BL:SWS:REP 22->277|YCJP_ECOLI|6e-36|34.0|256/280| TM:NTM 6 TM:REGION 11->33| TM:REGION 75->97| TM:REGION 108->130| TM:REGION 146->168| TM:REGION 184->206| TM:REGION 243->265| SEG 75->94|sliialattliaiiisamaa| BL:PDB:NREP 1 BL:PDB:REP 101->277|2r6gG|4e-20|30.9|175/284| RP:PDB:NREP 1 RP:PDB:REP 166->204|3dhwA|2e-10|41.0|39/203| RP:PFM:NREP 1 RP:PFM:REP 134->218|PF00528|3e-09|31.8|85/195|BPD_transp_1| HM:PFM:NREP 1 HM:PFM:REP 87->270|PF00528|1.1e-21|23.0|178/185|BPD_transp_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 1 RP:SCP:REP 12->277|2r6gG1|2e-26|24.0|263/284|f.58.1.1| OP:NHOMO 3463 OP:NHOMOORG 614 OP:PATTERN 331-421134343441713331--81161-4-----------------------3553212432---- ---1h213334-1123344-423349444443255514575427O*b2DIG5QKO12B--878BH4ERZJ58666GDA2---4-------------------------1---------------------------9BB78---76221311-12222222222221333--2-----1----EE266EG-953333233442243334TIAA4833454A2A45778777A*211111111111111-1---5411111-12133--11---1142442325344422666777766664333344443333355---5553F5-3C3333343534B2--1555b-16233D--231--1J--1876H2-1----11-111112-IDE1--535535588588688H---6--4-1AS--ZXXMcZSqjhWS44---9IBA89CG95--------4112--13-----------------------------3---2-144437998775344455BD5554346682223--3346-23343778G----1--3--------------1-1--111--11111---------222224----------1------------------126---1-1-5----------------------11--------26981413333333333-33333334333323333326766611123222222222222226-113332--499999999999---------11111-86E111222-----1--1----------1-22223244733344656----------1222222223254411111111111111-------------------171---1----1111---1---31---8MFC9AS9DA-2- -------------2------------------------------------------------------------------------------------------------------------------------------------------------3-----------1--------------1--------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 177 STR:RPRED 63.9 SQ:SECSTR ####################################################################################################cTTcHHHHHHHHHTTHccccccHHHHHHHHHHHHHHTTcHHHHHHHHTTHTTHHHHHHHHHHHTTccTTTTTHHHHHTccTHHHHHHTTHHHHHHHHHHHHHHHHHHHHTccHHHHHHcccGGGccHHHHGGGGcccccccHHHHHHHHHHTHHHHHHHHHHHTTTccccccTTTcc DISOP:02AL 1-4,8-8,277-278| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHccccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc //