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Streptococcus pneumoniae G54 (spne4)
Gene : ACF56738.1
DDBJ      :             ABC transporter, substrate binding protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  113/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:442 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   92->204 2i58A PDBj 3e-07 30.8 %
:RPS:PDB   41->438 1a7lA PDBj 2e-30 17.7 %
:RPS:SCOP  41->437 1eljA  c.94.1.1 * 7e-28 15.1 %
:HMM:SCOP  21->437 1eljA_ c.94.1.1 * 1.6e-62 27.1 %
:RPS:PFM   57->348 PF01547 * SBP_bac_1 6e-14 30.3 %
:HMM:PFM   61->352 PF01547 * SBP_bac_1 3.6e-31 24.4 279/314  
:HMM:PFM   389->442 PF12324 * HTH_15 6.7e-05 24.1 54/77  
:BLT:SWISS 43->438 YESO_BACSU 6e-16 26.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF56738.1 GT:GENE ACF56738.1 GT:PRODUCT ABC transporter, substrate binding protein GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(1532393..1533721) GB:FROM 1532393 GB:TO 1533721 GB:DIRECTION - GB:PRODUCT ABC transporter, substrate binding protein GB:NOTE identified by match to protein family HMM PF01547 GB:PROTEIN_ID ACF56738.1 GB:DB_XREF GI:194358290 LENGTH 442 SQ:AASEQ MKFRKLACTVLAGAAVLGLAACGNSGGSKDAAKSGGDGAKTEITWWAFPVFTQEKTGDGVGTYEKSIIEAFEKANPDIKVKLETIDFKSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKNGKLAELNDLFTDEFVKDVNNENIVQASKAGDKAYMYPISSAPFYMAMNKKMLEDAGVANLVKEGWTTDDFEKVLKALKDKGYTPGSLFSSGQGGDQGTRAFISNLYSGSVTDEKVSKYTTDDPKFVKGLEKATSWIKDNLINNGSQFDGGADIQNFANGQTSYTILWAPAQNGIQAKLLEASKVEVVEVPFPSDEGKPALEYLVNGFAVFNNKDDKKVAASKKFIQFIADDKEWGPKDVVRTGAFPVRTSFGKLYEDKRMETISGWTQYYSPYYNTIDGFAEMRTLWFPMLQSVSNGDEKPADALKAFTEKANETIKKAMKQ GT:EXON 1|1-442:0| BL:SWS:NREP 1 BL:SWS:REP 43->438|YESO_BACSU|6e-16|26.0|369/427| SEG 6->23|lactvlagaavlglaacg| SEG 25->40|sggskdaaksggdgak| BL:PDB:NREP 1 BL:PDB:REP 92->204|2i58A|3e-07|30.8|107/385| RP:PDB:NREP 1 RP:PDB:REP 41->438|1a7lA|2e-30|17.7|368/380| RP:PFM:NREP 1 RP:PFM:REP 57->348|PF01547|6e-14|30.3|271/282|SBP_bac_1| HM:PFM:NREP 2 HM:PFM:REP 61->352|PF01547|3.6e-31|24.4|279/314|SBP_bac_1| HM:PFM:REP 389->442|PF12324|6.7e-05|24.1|54/77|HTH_15| GO:PFM:NREP 2 GO:PFM GO:0005215|"GO:transporter activity"|PF01547|IPR006059| GO:PFM GO:0006810|"GO:transport"|PF01547|IPR006059| RP:SCP:NREP 1 RP:SCP:REP 41->437|1eljA|7e-28|15.1|371/380|c.94.1.1| HM:SCP:REP 21->437|1eljA_|1.6e-62|27.1|369/380|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 173 OP:NHOMOORG 113 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------2133--1----11---332-2----21---------------------------------------------------------------------------------------------------------1--------1----------------2-22-1-----2-2--21211137---------------------1-------------11---------1211111---122122211121122111112111-11---1111-11-2-------1--1----1-1---------------11------1--1-------------------------11111111113---------11--322-22244322--------1-11--------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------1----------------------------21---3------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 402 STR:RPRED 91.0 SQ:SECSTR ########################################ccEEEEccTTccHHHHTTccHHHHHHHHHHHHHHHHHHcccEEEEccTTHHHHHHHHGGGTccccEEEEEGGGHHHHHHTTccccccccHHHHHHHTTccHHHHGGGEETTEEccEEEEEEccEEEEETTTccccHTccccccccccTTHHHHHHHHHTTTcccccccccHHHHHHHHHHTTcEEEcccccccccccEEcccHHHHHHHHHHHHHHHTTcccTTTTccHHHHHHHHHTTcccEEEEcGGGHHHHHHTTcHTccEEEEcccccTTccccccEEEEEEEEEEEcTTcTTHHHHHHHHHHTTccHHHHHHHHHHccccEEccHHHHHHHTTcHHHHHHHHHHHcEEccccTTHHHHHHHHHHHHHHHHTTcccHHHHHHHHHccHHHHcccHHHc DISOP:02AL 1-3,23-41,441-443| PSIPRED ccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHcccccEEEEEcHHHHHHHHHcccEEEccHHHccccccccccHHHHHHcccccEEEEEEEEcccEEEEEEHHHHHHccccccccccccHHHHHHHHHHHHHcccccEEccccccccHHHHHHHHHHHccccccccccccEEEccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHcccEEEEEccccHHHHHHHHccccccccEEEEEcccccccccEEcccccEEEEEccccccHHHHHHHHHHHcccHHHHHHHHHHcccccccHHHHHHHccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcc //