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Streptococcus pneumoniae G54 (spne4)
Gene : ACF56827.1
DDBJ      :             Trk transporter
Swiss-Prot:             

Homologs  Archaea  41/68 : Bacteria  422/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.2.1d.286.1
:449 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->135 1lssA PDBj 1e-21 36.6 %
:BLT:PDB   228->356 1lssA PDBj 9e-10 24.8 %
:BLT:PDB   368->433 3jxoB PDBj 6e-06 38.5 %
:RPS:PDB   4->42 3dmeA PDBj 1e-05 41.0 %
:RPS:PDB   43->222 2bkoA PDBj 3e-13 10.7 %
:RPS:PDB   273->447 2bknA PDBj 4e-09 14.8 %
:RPS:SCOP  3->135 1id1A  c.2.1.9 * 1e-16 20.0 %
:RPS:SCOP  135->222 1lnqA4  d.286.1.1 * 1e-09 20.5 %
:RPS:SCOP  229->360 1id1A  c.2.1.9 * 4e-10 16.3 %
:RPS:SCOP  371->447 1vctA2  d.286.1.1 * 6e-09 21.2 %
:HMM:SCOP  1->150 1id1A_ c.2.1.9 * 6.4e-33 35.6 %
:HMM:SCOP  132->220 2fy8A2 d.286.1.1 * 4.6e-12 29.5 %
:HMM:SCOP  226->358 1lssA_ c.2.1.9 * 8.5e-22 25.0 %
:HMM:SCOP  360->447 2fy8A2 d.286.1.1 * 1.3e-11 27.6 %
:RPS:PFM   3->104 PF02254 * TrkA_N 6e-17 39.6 %
:RPS:PFM   152->213 PF02080 * TrkA_C 8e-05 39.1 %
:RPS:PFM   228->310 PF02254 * TrkA_N 3e-07 34.9 %
:RPS:PFM   381->447 PF02080 * TrkA_C 2e-05 34.3 %
:HMM:PFM   3->107 PF02254 * TrkA_N 1.2e-24 31.1 103/116  
:HMM:PFM   229->343 PF02254 * TrkA_N 7.9e-18 25.7 113/116  
:HMM:PFM   152->220 PF02080 * TrkA_C 3.5e-15 29.4 68/71  
:HMM:PFM   383->446 PF02080 * TrkA_C 1.8e-11 34.4 64/71  
:BLT:SWISS 1->436 TRKA1_METMA 4e-59 31.7 %
:REPEAT 2|3->207|228->434

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF56827.1 GT:GENE ACF56827.1 GT:PRODUCT Trk transporter GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(427178..428527) GB:FROM 427178 GB:TO 428527 GB:DIRECTION - GB:PRODUCT Trk transporter GB:NOTE identified by match to protein family HMM PF02080; match to protein family HMM PF02254 GB:PROTEIN_ID ACF56827.1 GB:DB_XREF GI:194358379 LENGTH 449 SQ:AASEQ MKIILVGGGKVGFALCRSLVAEKHDVLLIEQDEAVLNHIVSRFDIIGILGNGADFAILEQASVQDCDIFIALTEHDEVNMIAAVLAKKMGAKETIVRVRNPEYSNSYFKEKNILGFSLIVNPELLAARAIANIIDFPNALSVERFAGGRVSLMEFVVKSTSGLCQMPISDFRKKFGNVIVCAIEREHQIIIPSGDMTVQDKDRIFVTGNRVDMILFHNYFKSRAVKSLLIVGAGRIAYYLLGILKDSRIDTKVIEINPEIASFFSEKFPNLYIVQGDGTAKDILLEESAQHYDAVATLTGVDEENLITSMFLDRVGVQKNITKVNRTSLLEIINAPDFSSIITPKSIAVDTIMHFIRGRVNAQYSDLQAMHHLANGQIETLQFHIKEANKMTAKPLSQLKLKKGVLIAAIIRKGKTIFPTGEDMLEVGDKLXVTTLLPNITKIYDLIAR GT:EXON 1|1-449:0| BL:SWS:NREP 1 BL:SWS:REP 1->436|TRKA1_METMA|4e-59|31.7|426/448| NREPEAT 1 REPEAT 2|3->207|228->434| BL:PDB:NREP 3 BL:PDB:REP 1->135|1lssA|1e-21|36.6|131/132| BL:PDB:REP 228->356|1lssA|9e-10|24.8|128/132| BL:PDB:REP 368->433|3jxoB|6e-06|38.5|65/85| RP:PDB:NREP 3 RP:PDB:REP 4->42|3dmeA|1e-05|41.0|39/366| RP:PDB:REP 43->222|2bkoA|3e-13|10.7|168/190| RP:PDB:REP 273->447|2bknA|4e-09|14.8|173/190| RP:PFM:NREP 4 RP:PFM:REP 3->104|PF02254|6e-17|39.6|101/116|TrkA_N| RP:PFM:REP 152->213|PF02080|8e-05|39.1|61/71|TrkA_C| RP:PFM:REP 228->310|PF02254|3e-07|34.9|81/116|TrkA_N| RP:PFM:REP 381->447|PF02080|2e-05|34.3|67/71|TrkA_C| HM:PFM:NREP 4 HM:PFM:REP 3->107|PF02254|1.2e-24|31.1|103/116|TrkA_N| HM:PFM:REP 229->343|PF02254|7.9e-18|25.7|113/116|TrkA_N| HM:PFM:REP 152->220|PF02080|3.5e-15|29.4|68/71|TrkA_C| HM:PFM:REP 383->446|PF02080|1.8e-11|34.4|64/71|TrkA_C| GO:PFM:NREP 6 GO:PFM GO:0006813|"GO:potassium ion transport"|PF02254|IPR003148| GO:PFM GO:0006813|"GO:potassium ion transport"|PF02080|IPR006037| GO:PFM GO:0008324|"GO:cation transmembrane transporter activity"|PF02080|IPR006037| GO:PFM GO:0006813|"GO:potassium ion transport"|PF02254|IPR003148| GO:PFM GO:0006813|"GO:potassium ion transport"|PF02080|IPR006037| GO:PFM GO:0008324|"GO:cation transmembrane transporter activity"|PF02080|IPR006037| RP:SCP:NREP 4 RP:SCP:REP 3->135|1id1A|1e-16|20.0|130/153|c.2.1.9| RP:SCP:REP 135->222|1lnqA4|1e-09|20.5|88/92|d.286.1.1| RP:SCP:REP 229->360|1id1A|4e-10|16.3|132/153|c.2.1.9| RP:SCP:REP 371->447|1vctA2|6e-09|21.2|77/94|d.286.1.1| HM:SCP:REP 1->150|1id1A_|6.4e-33|35.6|146/0|c.2.1.9|1/2|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 132->220|2fy8A2|4.6e-12|29.5|88/0|d.286.1.1|1/2|TrkA C-terminal domain-like| HM:SCP:REP 226->358|1lssA_|8.5e-22|25.0|132/0|c.2.1.9|2/2|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 360->447|2fy8A2|1.3e-11|27.6|87/0|d.286.1.1|2/2|TrkA C-terminal domain-like| OP:NHOMO 521 OP:NHOMOORG 464 OP:PATTERN 11-12-----------1------12231331213111-111111-1121232211111111------- ---12---------1------1--11-----1-11121---11121--1---1111-----2111-1-12---------1211--1--1111-111-------11---1---------------------1----1---3333312-12--------------1---111----------------11----1111111211211122-1-1111111----1--111111-------------------11-11-----1-----11-----11----111----13311111111111-------------1--111----211--11-1111-1-2--------111--11-111-1-112-21-11-11-11----11111-------------111111111-1---------1-1--11-------11111111111111211-------------111-----------------------------1-----11111---------------------------------1-1111-------11----1111111111-11--1111112--1---1-----------1---1-----------------------111--111111111111111111111111111111---21-1------11111111111111111-11-11111111111111111111111111111111111111111111111111111111111111--11---------11111111111111111111----------1111111111111111111111111111111111111111111--------------111---------------11---------------------------1-3212-11--- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 448 STR:RPRED 99.8 SQ:SECSTR cEEEEEcccHHHHHHHHHcTTcEEEEEEccGGGHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHcccHHHHHHHHHHHHHHHcGGGHHHHHHHHHHHHHHHHHHHHHHHHTTccccHHHHHHHHHHcccEEEEEEccTTcTTTTccHHHHTHHHHccEEEEEEETTEEEEccTTccccTTcEEEEEEcHHHHHHHHHHHTTccccccEEEcccHHHHHHHHHTTTccEEEEEccGGGHHHHHHTHHHTTcEEEEccTTcHHHHHHTTcTTccEEEEccccHHHHHHHHHHHHHHccccccEEEEEcccGGGHHHHHHHTccEEEcHHHHHHHHHHTcccccHHHHHHHHHTcTTcccEEEEEEccTTcTTTTccHHHHcHHHccEEEEEEETEEEEcccTTccccTTcEEEEEEcHHHHHHHHHHcc# PSIPRED cEEEEEcccHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHcccEEEEcccccHHHHHHcccccccEEEEEcccHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHHHccccEEEccHHHHHHHHHHHHccccEEEEEEcccccEEEEEEEEccccccccccHHHHHcccccEEEEEEEcccEEEccccccEEccccEEEEEEEcHHHHHHHccccccccccEEEEcccHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHccccEEEEcccccHHHHHHccHHHccEEEEEcccHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHcccccEEEHHHHHHHHHHHHHHHHcccccccEEEEEEEccccEEEEEEEEccccccccccHHHcccccccEEEEEEEccEEEEEccccEEccccEEEEEEcHHHHHHHHHHHcc //