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Streptococcus pneumoniae G54 (spne4)
Gene : ACF56858.1
DDBJ      :             IS1167 transposase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  47/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:172 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   100->145 3bwgA PDBj 3e-04 21.7 %
:RPS:SCOP  108->136 2o3fA1  a.4.1.20 * 4e-04 24.1 %
:HMM:PFM   116->140 PF02796 * HTH_7 5.5e-05 52.0 25/45  

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF56858.1 GT:GENE ACF56858.1 GT:PRODUCT IS1167 transposase GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(560609..561127) GB:FROM 560609 GB:TO 561127 GB:DIRECTION - GB:PRODUCT IS1167 transposase GB:PROTEIN_ID ACF56858.1 GB:DB_XREF GI:194358410 LENGTH 172 SQ:AASEQ MEQLHFITKLLDIKDPNIQILDIINKDTHKEIIAKLDYDAPSCPECGNQLKKYDFQKPSKIPYLETTGMPTRILLRKRRFKCYHCSKMMVAETPLVKKNHQIPRIINQKIAQKLIEKISMTDIAHQLSISTSTVIRKLNDFHFECNFRNLPKIMSWDVETVRGVTVSIGRWR GT:EXON 1|1-172:0| RP:PDB:NREP 1 RP:PDB:REP 100->145|3bwgA|3e-04|21.7|46/221| HM:PFM:NREP 1 HM:PFM:REP 116->140|PF02796|5.5e-05|52.0|25/45|HTH_7| RP:SCP:NREP 1 RP:SCP:REP 108->136|2o3fA1|4e-04|24.1|29/83|a.4.1.20| OP:NHOMO 269 OP:NHOMOORG 47 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------6-----------A8---262288A22-------1-81---M5-A1----------------555-218A1F86CB1D-------11----12119CH111---------------------------------------------4------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 46 STR:RPRED 26.7 SQ:SECSTR ###################################################################################################cHHHHHHHHHHHHTTccccccHHHHHHTTccHHHHHHHHHHHHHTT########################### DISOP:02AL 1-3| PSIPRED ccccccHHHHcccccccEEEEEEEEcccEEEEEEEEccccccccccccEEEEEccEEEEEEEcccccccEEEEEEEccEEEEcccccEEEEEcccccccccccHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHcccccHHHcccEEEEEEEEEcccEEEEEccc //