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Streptococcus pneumoniae G54 (spne4)
Gene : cbpG
DDBJ      :cbpG         choline binding protein G
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  44/915 : Eukaryota  0/199 : Viruses  4/175   --->[See Alignment]
b.109.1b.47.1
:273 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   8->185 1p3cA PDBj 8e-12 28.3 %
:BLT:PDB   183->270 2vyuA PDBj 4e-18 43.7 %
:RPS:PDB   70->175 1a1rA PDBj 3e-04 11.9 %
:RPS:PDB   147->270 1e88A PDBj 5e-11 12.5 %
:RPS:SCOP  5->185 1p3cA  b.47.1.1 * 3e-37 26.6 %
:RPS:SCOP  190->273 2bibA1  b.109.1.1 * 3e-20 29.3 %
:HMM:SCOP  4->193 1qtfA_ b.47.1.1 * 2.4e-25 26.0 %
:HMM:SCOP  191->273 2bibA1 b.109.1.1 * 8.1e-25 54.3 %
:HMM:PFM   196->206 PF01473 * CW_binding_1 0.0001 63.6 11/19  
:HMM:PFM   214->232 PF01473 * CW_binding_1 1e-10 63.2 19/19  
:HMM:PFM   234->252 PF01473 * CW_binding_1 5.7e-10 57.9 19/19  
:HMM:PFM   11->173 PF00089 * Trypsin 9.4e-12 26.1 153/219  
:BLT:SWISS 12->155 GSEP_BACLD 7e-11 30.2 %
:BLT:SWISS 176->261 ALYS_BPHB3 2e-13 44.2 %
:PROS 235->246|PS00213|LIPOCALIN
:REPEAT 3|197->214|216->234|236->254

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55782.1 GT:GENE cbpG GT:PRODUCT choline binding protein G GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 348711..349532 GB:FROM 348711 GB:TO 349532 GB:DIRECTION + GB:GENE cbpG GB:PRODUCT choline binding protein G GB:NOTE identified by match to protein family HMM PF00089; match to protein family HMM PF01473 GB:PROTEIN_ID ACF55782.1 GB:DB_XREF GI:194357334 GB:GENE:GENE cbpG LENGTH 273 SQ:AASEQ MNVEGRGSANFIKDNVLITAAHNYYRHDYGKEADDIYVLPAVSPSQEPFGKIKVKEVRYLKEFRNLNSKDAREYDLALLILEEPIGAKLGTLGLPTSQKNLTGITVTITGYPSYNFKIHQMYTDKKQVLSDDGMFLDYQVDTLEGSSGSTVYDASHRVVGVHTLGDGANQINSAVKLNERNLPFIYSVLKGYSLEGWKKINGSWYHYRQHDKQTGWQEINDTWYYLDSSGKMLTDWQKVNGKWYYLNSNGAMVTGSQTIDGKVYNFASSGEWI GT:EXON 1|1-273:0| BL:SWS:NREP 2 BL:SWS:REP 12->155|GSEP_BACLD|7e-11|30.2|139/316| BL:SWS:REP 176->261|ALYS_BPHB3|2e-13|44.2|86/318| PROS 235->246|PS00213|LIPOCALIN|PDOC00187| NREPEAT 1 REPEAT 3|197->214|216->234|236->254| BL:PDB:NREP 2 BL:PDB:REP 8->185|1p3cA|8e-12|28.3|173/215| BL:PDB:REP 183->270|2vyuA|4e-18|43.7|87/300| RP:PDB:NREP 2 RP:PDB:REP 70->175|1a1rA|3e-04|11.9|101/152| RP:PDB:REP 147->270|1e88A|5e-11|12.5|120/160| HM:PFM:NREP 4 HM:PFM:REP 196->206|PF01473|0.0001|63.6|11/19|CW_binding_1| HM:PFM:REP 214->232|PF01473|1e-10|63.2|19/19|CW_binding_1| HM:PFM:REP 234->252|PF01473|5.7e-10|57.9|19/19|CW_binding_1| HM:PFM:REP 11->173|PF00089|9.4e-12|26.1|153/219|Trypsin| RP:SCP:NREP 2 RP:SCP:REP 5->185|1p3cA|3e-37|26.6|177/215|b.47.1.1| RP:SCP:REP 190->273|2bibA1|3e-20|29.3|82/232|b.109.1.1| HM:SCP:REP 4->193|1qtfA_|2.4e-25|26.0|181/0|b.47.1.1|1/1|Trypsin-like serine proteases| HM:SCP:REP 191->273|2bibA1|8.1e-25|54.3|81/0|b.109.1.1|1/1|Cell wall binding repeat| OP:NHOMO 299 OP:NHOMOORG 48 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------1--------1-------------------------25-K-----------------------------------------------------------------------------------------------------------------------1---------111----------1-----1---1--------111-------1-----------------1--2-----------311BB9CAAA9AC9--------------------------1k-------W-X-2---564-1-----2-----------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------1---------------------------------------------------------1---------------------------------------------------1-1----------------------------------------------- STR:NPRED 272 STR:RPRED 99.6 SQ:SECSTR #EcccEEEEEEEETTEEEEcHHHHEETTTTEEccccEEEETccTTccTTccEEEEEEEccHHHHHHcEETTccccccEEETTTTEEEEEccTTcccccccccccccEccccccccccccTEETcccccEEcccEEccccccccTTcTTTEEEcccEEEEEEccccEEEEEEcccccccEEccccccGGGTcccccccEEETTEEEcccccccccccccETTEEEEccccHHHHccETccccccEEETcTTccccccEEETTEEEcccccTccc PSIPRED cEEEEEEEEEEEEccEEEEccEEEEEcccccccEEEEEEEEcccccccEEEEEEEEEEEccccccccccccccccEEEEEEccccccccccEEEccccccccccEEEEEEEccccccccEEEEEEcEEEEEcccEEEEEEEEEccccccEEEEEccEEEEEEEcccEEccccEEEEEEccccEEEEEcccccEEEEEEEEccEEEEEcccccEEEEEEEccEEEEEcccccEEEEEEEEccEEEEEcccccEEEEEEEEccEEEEEccccccc //