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Streptococcus pneumoniae G54 (spne4)
Gene : dltD
DDBJ      :dltD         undecaprenol-phosphate-poly(glycerophosphate subunit) D-alanine
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  125/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:422 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   30->422 3bmaC PDBj 0.0 100.0 %
:RPS:PDB   30->422 3bmaB PDBj e-117 96.2 %
:RPS:PFM   38->98 PF04915 * DltD_N 3e-09 44.1 %
:RPS:PFM   99->263 PF04918 * DltD_M 5e-28 39.4 %
:RPS:PFM   264->390 PF04914 * DltD_C 8e-30 51.6 %
:HMM:PFM   99->263 PF04918 * DltD_M 2.6e-61 39.5 162/163  
:HMM:PFM   264->393 PF04914 * DltD_C 2.1e-58 55.8 129/130  
:HMM:PFM   36->98 PF04915 * DltD_N 1.3e-25 50.8 61/62  
:BLT:SWISS 38->390 DLTD_BACSU 2e-35 30.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55922.1 GT:GENE dltD GT:PRODUCT undecaprenol-phosphate-poly(glycerophosphate subunit) D-alanine GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(2007023..2008291) GB:FROM 2007023 GB:TO 2008291 GB:DIRECTION - GB:GENE dltD GB:PRODUCT undecaprenol-phosphate-poly(glycerophosphate subunit) D-alanine GB:NOTE identified by match to protein family HMM PF04914; match to protein family HMM PF04915; match to protein family HMM PF04918 GB:PROTEIN_ID ACF55922.1 GB:DB_XREF GI:194357474 GB:GENE:GENE dltD LENGTH 422 SQ:AASEQ MLKRLWMIFGPVLIAGLLVFLLIFFYPTEMHHNLGAEKRSAVATTIDSFKERSQKVRALSDPNVRFVPFFGSSEWLRFDGAHPAVLAEKYNRSYRPYLLGQGGAASLNQYFGMQQMLPQLENKQVVYVISPQWFSKNGYDPAAFQQYFNGDQLTSFLKHQSGDQASQYAATRLLQQFPNVAMKDLVQKLASKEELSTADNEMIELLARFNERQASFFGQFSVRGYVNYDKHVAKYLKILPDQFSYQAIEDVVKADAEKNTSNNEMGMENYFYNEQIKKDLKKLKDSQKSFTYLKSPEYNDLQLVLTQFSKSKVNPIFIIPPVNKKWMDYAGLREDMYQQTVQKIRYQLESQGFTNIADFSKDGGEPFFMKDTIHLGWLGWLAFDKAVDPFLSNPTPAPTYHLNERFFSKDWATYDGDVKEFQ GT:EXON 1|1-422:0| BL:SWS:NREP 1 BL:SWS:REP 38->390|DLTD_BACSU|2e-35|30.3|347/392| TM:NTM 1 TM:REGION 5->27| SEG 275->289|qikkdlkklkdsqks| BL:PDB:NREP 1 BL:PDB:REP 30->422|3bmaC|0.0|100.0|393/394| RP:PDB:NREP 1 RP:PDB:REP 30->422|3bmaB|e-117|96.2|393/393| RP:PFM:NREP 3 RP:PFM:REP 38->98|PF04915|3e-09|44.1|59/62|DltD_N| RP:PFM:REP 99->263|PF04918|5e-28|39.4|160/162|DltD_M| RP:PFM:REP 264->390|PF04914|8e-30|51.6|126/130|DltD_C| HM:PFM:NREP 3 HM:PFM:REP 99->263|PF04918|2.6e-61|39.5|162/163|DltD_M| HM:PFM:REP 264->393|PF04914|2.1e-58|55.8|129/130|DltD_C| HM:PFM:REP 36->98|PF04915|1.3e-25|50.8|61/62|DltD_N| OP:NHOMO 144 OP:NHOMOORG 125 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1222222231222222--1111222---1---111111--1111111111111111111111111111111111111111111111111111111111111111-2111111111111111111111111----1-------1-1-1----------------11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 393 STR:RPRED 93.1 SQ:SECSTR #############################ccccHHHHHHHHHHccHHHHHcHHHHHHHHTcccccEEEEEcccTTccccTTcHHHHHHHTTcccEEEEEccTTccHHHHHHHHTTcHHHHTTcEEEEEccGGGccTTcccHHHHTTTccHHHHHHHHHHccccHHHHHHHHHHHHHcTTcTTHHHHHHHHTTccccHHHHHHHHHHHHHHHHHHHHHGGGccTTccHHHHHTTTTTTTccccccHHHHHHHHHHHHHHHTTTccccccHHHHHHHTTcccGGGTTTTccccccccTHHHHHHHHHHHHHHTTcEEEEEEccccHHHHHHTTccHHHHHHHHHHHHHHHHTTTcccEEEcTTcTTcTTcccccccccTHHHHHHHHHHHHHHHcccccccccccGGGGcHHHHTccccGGGGc DISOP:02AL 1-1,41-45,253-263,280-287,419-423| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccHHHHHHHHHHHHHHHcccccEEEEEccHHHHHcccccHHHHHHHHccccccEEEccccHHHHHHHHHHHHHHHHccccEEEEEEccHHHccccccHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHcccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHcccHHHHHHHHHHHHHHHHHccccEEEccccccccccEEEEcHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHccccHHHcc //