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Streptococcus pneumoniae G54 (spne4)
Gene : fabF
DDBJ      :fabF         3-oxoacyl-(acyl-carrier-protein) synthase II
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  867/915 : Eukaryota  185/199 : Viruses  0/175   --->[See Alignment]
c.95.1
:411 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->409 1ox0A PDBj 0.0 100.0 %
:RPS:PDB   5->409 1e5mA PDBj 4e-87 47.2 %
:RPS:SCOP  3->253 1dd8A1  c.95.1.1 * 2e-73 34.1 %
:RPS:SCOP  253->407 1b3nA2  c.95.1.1 * 7e-33 49.0 %
:HMM:SCOP  3->251 1e5mA1 c.95.1.1 * 1.5e-73 41.8 %
:HMM:SCOP  213->409 1tqyA2 c.95.1.1 * 1.1e-62 42.1 %
:RPS:PFM   5->246 PF00109 * ketoacyl-synt 5e-31 41.4 %
:RPS:PFM   274->360 PF02801 * Ketoacyl-synt_C 3e-14 44.8 %
:HMM:PFM   4->246 PF00109 * ketoacyl-synt 1.6e-58 35.7 235/253  
:HMM:PFM   254->364 PF02801 * Ketoacyl-synt_C 7.1e-35 39.6 111/119  
:BLT:SWISS 1->410 FABF_BACSU e-100 45.1 %
:PROS 155->171|PS00606|B_KETOACYL_SYNTHASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF56679.1 GT:GENE fabF GT:PRODUCT 3-oxoacyl-(acyl-carrier-protein) synthase II GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 379565..380800 GB:FROM 379565 GB:TO 380800 GB:DIRECTION + GB:GENE fabF GB:PRODUCT 3-oxoacyl-(acyl-carrier-protein) synthase II GB:NOTE identified by match to protein family HMM PF00109; match to protein family HMM PF02801; match to protein family HMM TIGR03150 GB:PROTEIN_ID ACF56679.1 GB:DB_XREF GI:194358231 GB:GENE:GENE fabF LENGTH 411 SQ:AASEQ MKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEIQDFPFDKYFVKKDTNRFDNYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGKEVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKRWENR GT:EXON 1|1-411:0| BL:SWS:NREP 1 BL:SWS:REP 1->410|FABF_BACSU|e-100|45.1|410/413| PROS 155->171|PS00606|B_KETOACYL_SYNTHASE|PDOC00529| SEG 30->40|tgkigiggitk| BL:PDB:NREP 1 BL:PDB:REP 1->409|1ox0A|0.0|100.0|409/414| RP:PDB:NREP 1 RP:PDB:REP 5->409|1e5mA|4e-87|47.2|405/411| RP:PFM:NREP 2 RP:PFM:REP 5->246|PF00109|5e-31|41.4|232/245|ketoacyl-synt| RP:PFM:REP 274->360|PF02801|3e-14|44.8|87/118|Ketoacyl-synt_C| HM:PFM:NREP 2 HM:PFM:REP 4->246|PF00109|1.6e-58|35.7|235/253|ketoacyl-synt| HM:PFM:REP 254->364|PF02801|7.1e-35|39.6|111/119|Ketoacyl-synt_C| RP:SCP:NREP 2 RP:SCP:REP 3->253|1dd8A1|2e-73|34.1|249/253|c.95.1.1| RP:SCP:REP 253->407|1b3nA2|7e-33|49.0|155/161|c.95.1.1| HM:SCP:REP 3->251|1e5mA1|1.5e-73|41.8|249/250|c.95.1.1|1/1|Thiolase-like| HM:SCP:REP 213->409|1tqyA2|1.1e-62|42.1|197/205|c.95.1.1|1/1|Thiolase-like| OP:NHOMO 4100 OP:NHOMOORG 1052 OP:PATTERN -------------------------------------------------------------------- 2371L2333331-1DCDJJ-JDBBS9JIJJJDEDCD74562QFO1111121123211411NJ21Q5SXGU31111111-1112111111114111111-257553I66241111111111111111111211111122255111J346456691111222211322DDCV51111111111111111111121M111111112111111121147112111411111111193111111111111111111112-111111-1-11111111111111122211111241111111111111111111111111111111111111431111111111J1551111112--1211211311111111111111318222233333754333344633333333333333-4464654447425668546665554852253333333441111111113322113111111111111111111111111111111211112221553342FC87973345CCCC2G564222312568123324336732332223411122221222225143251243142221353633C463313YL331321111111111111111111111334432275335466666566666666666661-22221111111B283243255A288322-522222323353522222433483B942222222222222222522322222174656654556511243433365664395611113111111133111441132214A44357D66352622879411111111234481222224644443333333322222212--1111--------1-1-------------------------1111111111191 1152dp3-311-1126DD7RGILPcSS222433KL86AAA58A344KIELFCE9A8QNE878111111-1111112112111111111-113D112------4111-173L24243-2121121412215A2-1211111222411212-31142422121228714547A54872346*6355D845AG473352223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 410 STR:RPRED 99.8 SQ:SECSTR cccccEEEEEEEEEcTTcccHHHHHHHHHTTcccEEEccccccTTccccEEEccccccGGGTccHHHHHTccHHHHHHHHHHHHHHHHHTccccTTTGGGEEEEEEcccccHHHHHHHHHHHHHHcGGGccTTHHHHHcTTHHHHHHHHHHTccccEEccccGGGHHHHHHHHHHHHHHTTcccEEEEEEEEccccHHHHHHHHHTTccccTTcGGGTccTTcTTccccccccEEEEEEEEEHHHHHHTTccccEEEEEEEEEEcccccccccTTcHHHHHHHHHHHHHHTccGGGccEEEccccccHHHHHHHHHHHHHHHGGGcEEEcTHHHHcccGGGHHHHHHHHHHHHHHHTEEcccTTcccccTTccccccccccEEccccEEEEEEEETTTEEEEEEEEcccc# DISOP:02AL 1-2,272-272,410-412| PSIPRED cccccEEEEEEEEEEcccccHHHHHHHHHccccccccccccccccccccccEEcccccccccccHHHHHHccHHHHHHHHHHHHHHHHccccHHHcccccEEEEEEcccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHcccccccccccccccccccccccEEEEEEEEEEEEEcHHHHHHcccEEEEEEEEEEEEccccccccccccHHHHHHHHHHHHHHccccHHHccEEEccccccccccHHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHcccccccccccEEEEEccccccEEEEEEEEccccc //