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Streptococcus pneumoniae G54 (spne4)
Gene : glyS
DDBJ      :glyS         glycyl-tRNA synthetase beta chain
Swiss-Prot:SYGB_STRP4   RecName: Full=Glycyl-tRNA synthetase beta subunit;         EC=6.1.1.14;AltName: Full=Glycine--tRNA ligase beta subunit;         Short=GlyRS;

Homologs  Archaea  0/68 : Bacteria  671/915 : Eukaryota  16/199 : Viruses  0/175   --->[See Alignment]
a.203.1a.211.1
:678 amino acids
:SECSTR
:PSIPRED
:RPS:PDB   338->493 2cqzA PDBj 1e-14 19.7 %
:RPS:SCOP  338->462 1xx7A  a.211.1.1 * 3e-14 25.0 %
:RPS:SCOP  449->532 1riqA1  a.203.1.1 * 4e-11 22.6 %
:HMM:SCOP  347->464 2paqA1 a.211.1.1 * 0.00016 24.8 %
:RPS:PFM   5->547 PF02092 * tRNA_synt_2f e-124 46.4 %
:HMM:PFM   5->547 PF02092 * tRNA_synt_2f 1.7e-197 46.8 541/549  
:HMM:PFM   603->662 PF05746 * DALR_1 9.1e-06 23.3 60/119  
:BLT:SWISS 1->678 SYGB_STRP4 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF56864.1 GT:GENE glyS GT:PRODUCT glycyl-tRNA synthetase beta chain GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(1355541..1357577) GB:FROM 1355541 GB:TO 1357577 GB:DIRECTION - GB:GENE glyS GB:PRODUCT glycyl-tRNA synthetase beta chain GB:NOTE identified by match to protein family HMM PF02092; match to protein family HMM PF05746; match to protein family HMM TIGR00211 GB:PROTEIN_ID ACF56864.1 GB:DB_XREF GI:194358416 GB:GENE:GENE glyS LENGTH 678 SQ:AASEQ MTKNLLVELGLEELPAYVVTPSEKQLGEKMAAFLKENRLSFEAIQTFSTPRRLAVRVTGLSDKQSDLTEDFKGPAKKIALDSDGNFTKAAQGFVRGKGLTVEDIEFREIKGEEYVYVTKEEVGQAVEAIVPGVVDVLKSLTFPVSMHWAGNSFEYIRPVHTLTVLLDEQEFDLDFLDIKGSRVSRGHRFLGKETKIQSALSYEEDLRKQFVIADPCEREQMIVDQIKEIEAKHGVRIEIDADLLNEVLNLVEYPTAFMGSFDAKYLEVPEEVLVTSMKEHQRYFVVRDQDGKLLPNFISVRNGNAERLKNVIKGNEKVLVARLEDGEFFWREDQKLVISDLVEKLNNVTFHEKIGSLREHMIRTGQITVLLAEKAGLSVDETVDLARAAAIYKFDLLTGMVGEFDELQGIMGEKYTLLAGETPAVAAAIREHYMPTSAEGELPESKVGAVLAIADKLDTILSFFSVGLIPSGSNDPYALRRATQGVVRILDAFGWHIAMDELIDSLYALKFDSLTYENKAEVMDFIKARVDKMMGSTPKDIKEAVLAGSNFVVADMLEAASALVEVSKEEDFKPSVESLSRAFNLAEKAEGVATVDSALFENDQEKALAEAVETLVLSGPASQQLKQLFALSPVIDAFFENTMVMAEDQAVRQNRLAILSQLTKKAAKFACFNQINTK GT:EXON 1|1-678:0| SW:ID SYGB_STRP4 SW:DE RecName: Full=Glycyl-tRNA synthetase beta subunit; EC=6.1.1.14;AltName: Full=Glycine--tRNA ligase beta subunit; Short=GlyRS; SW:GN Name=glyS; OrderedLocusNames=SPG_1402; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->678|SYGB_STRP4|0.0|100.0|678/678| GO:SWS:NREP 6 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| SEG 165->177|lldeqefdldfld| RP:PDB:NREP 1 RP:PDB:REP 338->493|2cqzA|1e-14|19.7|152/173| RP:PFM:NREP 1 RP:PFM:REP 5->547|PF02092|e-124|46.4|539/547|tRNA_synt_2f| HM:PFM:NREP 2 HM:PFM:REP 5->547|PF02092|1.7e-197|46.8|541/549|tRNA_synt_2f| HM:PFM:REP 603->662|PF05746|9.1e-06|23.3|60/119|DALR_1| GO:PFM:NREP 6 GO:PFM GO:0000166|"GO:nucleotide binding"|PF02092|IPR002311| GO:PFM GO:0004820|"GO:glycine-tRNA ligase activity"|PF02092|IPR002311| GO:PFM GO:0005524|"GO:ATP binding"|PF02092|IPR002311| GO:PFM GO:0005737|"GO:cytoplasm"|PF02092|IPR002311| GO:PFM GO:0006412|"GO:translation"|PF02092|IPR002311| GO:PFM GO:0006426|"GO:glycyl-tRNA aminoacylation"|PF02092|IPR002311| RP:SCP:NREP 2 RP:SCP:REP 338->462|1xx7A|3e-14|25.0|120/172|a.211.1.1| RP:SCP:REP 449->532|1riqA1|4e-11|22.6|84/212|a.203.1.1| HM:SCP:REP 347->464|2paqA1|0.00016|24.8|109/0|a.211.1.1|1/1|HD-domain/PDEase-like| OP:NHOMO 696 OP:NHOMOORG 687 OP:PATTERN -------------------------------------------------------------------- 111--------------------------------------111--------------111---1-------------1111-11111----------------------111111111111111---------------------1111111111111111111111111111111111111-----111--1---------------111111-------11111111111--------------------1111111111111111111111111111111111111111111111111111111111111111111111----------------1---------111--111111111111----111-1-111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111------------------------------------------1111111111--- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------11117111111121-2-------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 161 STR:RPRED 23.7 SQ:SECSTR ##########################################################################################################################################################################################################################################################################################################################################HHHHHHHHHHHHGGGGTccTccccccHHHHHHHHHHHHHHHHHHHHHTTccccHHHHHHHHHHTTTTHHHHccccTTTTTTccHHHHHHHHHHHTcGGGHHHHHcc##HHHHTccHHHHHHHHHHHHHHHHHHHHHHHTTccccGGGGGHHHGGGGHHHHHHH######################################################################################################################################################################################### PSIPRED cccccEEEEcHHHccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccEEEEEEccccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHccccHHHEEEEEEccEEEEEEEEEcccccHHHHHHHHHHHHHccccccEEEcccccEEEEccHHHHHHHHcccEEEEEEccEEEccEEEcccccccccEEccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccEEEccHHHHHHHHHHHcccEEEEEEEcHHHHcccHHHHHHHHHHccEEEEEEcccccccccEEEEEccccccHHHHHHccHHHcccHHHHHHHHHHHHHcccHHHHHHHHHccEEEHHcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccHHHHccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccHHHcccc //