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Streptococcus pneumoniae G54 (spne4)
Gene : lpdA
DDBJ      :lpdA         dihydrolipoyl dehydrogenase
Swiss-Prot:             

Homologs  Archaea  65/68 : Bacteria  874/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
b.84.1c.3.1d.87.1
:567 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->78 1ghjA PDBj 1e-12 40.3 %
:BLT:PDB   112->562 3ladA PDBj 2e-79 39.4 %
:RPS:PDB   5->79 3cdxE PDBj 7e-14 23.3 %
:RPS:PDB   112->562 1dxlA PDBj 3e-75 38.8 %
:RPS:SCOP  1->84 1y8nB1  b.84.1.1 * 2e-13 36.9 %
:RPS:SCOP  112->469 1gosA1  c.3.1.2 * 3e-30 11.8 %
:RPS:SCOP  446->567 1bhyA3  d.87.1.1 * 1e-34 39.3 %
:HMM:SCOP  1->98 1y8oB1 b.84.1.1 * 2.7e-25 41.8 %
:HMM:SCOP  107->465 1kf6A2 c.3.1.4 * 1.5e-54 38.8 %
:HMM:SCOP  442->567 1fecA3 d.87.1.1 * 1e-36 49.2 %
:RPS:PFM   8->76 PF00364 * Biotin_lipoyl 2e-05 37.7 %
:RPS:PFM   113->411 PF07992 * Pyr_redox_2 9e-22 38.0 %
:RPS:PFM   446->552 PF02852 * Pyr_redox_dim 2e-25 53.3 %
:HMM:PFM   113->413 PF07992 * Pyr_redox_2 1.9e-46 42.5 193/202  
:HMM:PFM   445->552 PF02852 * Pyr_redox_dim 4.7e-38 45.4 108/110  
:HMM:PFM   4->74 PF00364 * Biotin_lipoyl 5.2e-21 36.6 71/74  
:BLT:SWISS 1->83 ACOC_BACSU 1e-16 44.6 %
:BLT:SWISS 112->562 DLDH2_BACSU 3e-81 43.5 %
:PROS 146->156|PS00076|PYRIDINE_REDOX_1
:PROS 27->56|PS00189|LIPOYL
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF56733.1 GT:GENE lpdA GT:PRODUCT dihydrolipoyl dehydrogenase GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(1037656..1039359) GB:FROM 1037656 GB:TO 1039359 GB:DIRECTION - GB:GENE lpdA GB:PRODUCT dihydrolipoyl dehydrogenase GB:NOTE identified by match to protein family HMM PF00070; match to protein family HMM PF00364; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR01350 GB:PROTEIN_ID ACF56733.1 GB:DB_XREF GI:194358285 GB:GENE:GENE lpdA LENGTH 567 SQ:AASEQ MALEVIMPKAGVDMTEGQIVQWNKKVGEFVKEGEILLEIMTDKVSMELEAEEDGYLIAILKGDGETVPVTEVIGYLGEERENIPTAGAASPEASPVPVASTSNDDGKSDDAFDIVVIGGGPAGYVAAIKAAQLGGKVALVEKSELGGTCLNRGCIPTKTYLHNAEIIENIGHAANRGIVIENPNFTVDMEKLLETKSKVVNTLVGGVAGLLRSYGVTVHKGIGTITKDKNVLVNGSELLETKKIILAGGSKVSKINVPGMESPLVMTSDDILEMNEVPESLVIIGGGVVGIELGQAFMTFGSKVTVIEMMDRIVPAMDAEVSKNLRLILERKGMTILTGTKLQEIIEENGQLRIKVEGKDDIIASKALLSIGRMPDLEGIGEVEFELDRGCIKVNEYMETSVPGIYAPGDINGTKMLAHAAFRMGEVSAENALKGNHAVAKLNLTPAAIYTLPEVAAVGLTEEQAREKYDVAIGKFNFAANGRAIASDAAQGFVKVIADKKYGEILGVHIIGPAAAELINEASSIIEMEITVEEMLKTIHGHPTYSEVMYEAFADVLGMAIHSPKKK GT:EXON 1|1-567:0| BL:SWS:NREP 2 BL:SWS:REP 1->83|ACOC_BACSU|1e-16|44.6|83/398| BL:SWS:REP 112->562|DLDH2_BACSU|3e-81|43.5|444/474| PROS 146->156|PS00076|PYRIDINE_REDOX_1|PDOC00073| PROS 27->56|PS00189|LIPOYL|PDOC00168| SEG 86->100|agaaspeaspvpvas| SEG 282->291|viigggvvgi| BL:PDB:NREP 2 BL:PDB:REP 2->78|1ghjA|1e-12|40.3|77/79| BL:PDB:REP 112->562|3ladA|2e-79|39.4|449/472| RP:PDB:NREP 2 RP:PDB:REP 5->79|3cdxE|7e-14|23.3|73/326| RP:PDB:REP 112->562|1dxlA|3e-75|38.8|449/467| RP:PFM:NREP 3 RP:PFM:REP 8->76|PF00364|2e-05|37.7|69/74|Biotin_lipoyl| RP:PFM:REP 113->411|PF07992|9e-22|38.0|266/275|Pyr_redox_2| RP:PFM:REP 446->552|PF02852|2e-25|53.3|107/110|Pyr_redox_dim| HM:PFM:NREP 3 HM:PFM:REP 113->413|PF07992|1.9e-46|42.5|193/202|Pyr_redox_2| HM:PFM:REP 445->552|PF02852|4.7e-38|45.4|108/110|Pyr_redox_dim| HM:PFM:REP 4->74|PF00364|5.2e-21|36.6|71/74|Biotin_lipoyl| GO:PFM:NREP 5 GO:PFM GO:0005737|"GO:cytoplasm"|PF02852|IPR004099| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF02852|IPR004099| GO:PFM GO:0045454|"GO:cell redox homeostasis"|PF02852|IPR004099| GO:PFM GO:0050660|"GO:FAD binding"|PF02852|IPR004099| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02852|IPR004099| RP:SCP:NREP 3 RP:SCP:REP 1->84|1y8nB1|2e-13|36.9|84/97|b.84.1.1| RP:SCP:REP 112->469|1gosA1|3e-30|11.8|356/385|c.3.1.2| RP:SCP:REP 446->567|1bhyA3|1e-34|39.3|122/128|d.87.1.1| HM:SCP:REP 1->98|1y8oB1|2.7e-25|41.8|98/0|b.84.1.1|1/1|Single hybrid motif| HM:SCP:REP 107->465|1kf6A2|1.5e-54|38.8|273/312|c.3.1.4|1/1|FAD/NAD(P)-binding domain| HM:SCP:REP 442->567|1fecA3|1e-36|49.2|126/128|d.87.1.1|1/1|FAD/NAD-linked reductases, dimerisation (C-terminal) domain| OP:NHOMO 4978 OP:NHOMOORG 1133 OP:PATTERN 22211174666777761443411341122361222322121112212111332222222223441--- 4445854455644495677-9622866666635444378644455545455256A444334594647674412223331-124341215541-522233333384553522222222111111141212222233276645111554445445123333323423355475333333333333433555312554444444525554456A55854453434477644444773555555555555554A7954231541222266332335565245575565555764444334444444444444444446554445557525-244444542522544--2142--13-1-142152433235546124416644544444687455454545455575654556-567477687A634554669777774C88657666655765555555575535565223222222211444434334344422231747844645888897975555774666664568758693356435456545553476311143444444457454323835542355333-435265442333354-4111-------------------212673447754535622222242422322223231-2764611111154435445556566655-555556655556545455544433333554556555547555644444445315666666666662133111114454258653332323333332237665755553446778666656667554444444534444446555555344443343342222222223-555554111111111-412222-1-32211323131123---2212331333642 5511326-E55-3332333211223223322223323433333221544455543335442334444442344445534524444323-75334545244354548-3B576744697545554CB1H2S*B-C9O4252B467846455735A3C7565AE36531533755857767*554659DCG3D7BC88679 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 550 STR:RPRED 97.0 SQ:SECSTR EEEEcccGGGEEEccccEEEEEcccTTcEEcTTcEEEEEccccccEEEEccccEEEEEEEcccccEEcTTcEEEEEEEEcccHHH#################cTTcHHHHHccEEEEcccHHHHHHHHHHHHHTccEEEEEcccccccHHHHcHHHHHHHHHHHHHHHHHHHTHHHHTccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHTcEEEEccEEEEETTEEEEcccEEEEccEEEEcccEEEcccTTcccccccEEcHHHHTTccccccEEEEccccHHHHHHHHHHHHHTcEEEEEcccccccTTccHHHHHHHHHHHHHccccEEccEEEEEEEcccccEEEEEEEcccEEEcEEEccccEEEccTTccTTTcccccccccccTTcccccTTEEEccTTccccccHHHHHHHHHHHHHHHHTTccccccTTcccEEEccccEEEEEEccHHHHHHTTcEEEEEEEGGGcHHHHHHcccccEEEEEEETTTccEEEEEEEETTHHHHHHHHHHHHHTTccHHHHHTcccccccTTHHHHHHHHHHHcccccccccc DISOP:02AL 83-109,565-568| PSIPRED ccEEEEccccccccccEEEEEEEEccccEEccccEEEEEEccccccccccccccEEEEEEEccccEEEcccEEEEEcccccccccccccccccccccccccccccccccccccEEEEcccHHHHHHHHHHHHcccEEEEEEEcccccEEEEEccccHHHHHHHHHHHHHHHHHHcccEEEccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEccccEEEEccEEEEEEEEEEEEcccccccccccccccccEEEHHHHHcHHHcccEEEEEcccHHHHHHHHHHHHcccEEEEEEEcccccccccHHHHHHHHHHHHHcccEEEEccEEEEEEEcccEEEEEEccccEEEEEEEEEEcccEEcccccHHcccEEEccEEEEccEEEcccccEEEEEEcccccccHHHHHHHHHHHHHHHHcccccccccccccEEEEccccEEEEEccHHHHHHcccEEEEEEEEccccccccccccEEEEEEEEEcccccEEEEEEEEccHHHHHHHHHHHHHccccHHHHHccccccccHHHHHHHHHHHHHcccccccccc //