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Streptococcus pneumoniae G54 (spne4)
Gene : lplA
DDBJ      :lplA         lipoate protein ligase A
Swiss-Prot:             

Homologs  Archaea  26/68 : Bacteria  339/915 : Eukaryota  143/199 : Viruses  0/175   --->[See Alignment]
d.104.1d.224.1
:329 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->329 1vqzA PDBj 0.0 99.4 %
:RPS:PDB   1->241 2artA PDBj 4e-49 29.3 %
:RPS:SCOP  2->241 1vqzA2  d.104.1.3 * e-105 98.3 %
:RPS:SCOP  242->329 1vqzA1  d.224.1.3 * 1e-28 98.9 %
:HMM:SCOP  1->241 1vqzA2 d.104.1.3 * 4.6e-82 43.6 %
:HMM:SCOP  242->329 1vqzA1 d.224.1.3 * 6.5e-26 45.5 %
:RPS:PFM   53->133 PF03099 * BPL_LplA_LipB 2e-04 33.3 %
:RPS:PFM   155->227 PF12252 * SidE 7e-04 37.5 %
:RPS:PFM   242->325 PF10437 * Lip_prot_lig_C 2e-16 45.2 %
:HMM:PFM   242->326 PF10437 * Lip_prot_lig_C 9.9e-31 48.2 85/86  
:HMM:PFM   43->154 PF03099 * BPL_LplA_LipB 5e-25 29.5 112/125  
:HMM:PFM   195->238 PF11199 * DUF2891 0.001 31.8 44/326  
:BLT:SWISS 1->327 LPLA_BACSU 3e-89 47.1 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55541.1 GT:GENE lplA GT:PRODUCT lipoate protein ligase A GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(1036603..1037592) GB:FROM 1036603 GB:TO 1037592 GB:DIRECTION - GB:GENE lplA GB:PRODUCT lipoate protein ligase A GB:NOTE Morris,T.W. 1994 Journ.Biol.Chem.; identified by match to protein family HMM PF03099; match to protein family HMM TIGR00545 GB:PROTEIN_ID ACF55541.1 GB:DB_XREF GI:194357093 GB:GENE:GENE lplA LENGTH 329 SQ:AASEQ MKYIINHSNDTAFNIALEEYAFKHLLDEDQIFLLWINKPSIIVGRHQNTIEEINRDYVRENGIEVVRRISGGGAVYHDLNNLNYTIISKEDENKAFDFKSFSTPVINTLAQLGVKAEFTGRNDLEIDGKKFCGNAQAYINGRIMHHGCLLFDVDLSVLANALKVSKDKFESKGVKSVRARVTNIINELPKKITVEKFRDLLLEYMKKEYPEMTEYVFSEEELAEINHIKDTKFGTWDWNYGKSPEFNVRRGTKFTSGKVEVFANVTESKIQDIKIYGDFFGIEDVAAVEDVLRGVKYEREDVLKALKTIDITRYFAGISREEIAEAVVG GT:EXON 1|1-329:0| BL:SWS:NREP 1 BL:SWS:REP 1->327|LPLA_BACSU|3e-89|47.1|327/331| BL:PDB:NREP 1 BL:PDB:REP 2->329|1vqzA|0.0|99.4|325/326| RP:PDB:NREP 1 RP:PDB:REP 1->241|2artA|4e-49|29.3|229/247| RP:PFM:NREP 3 RP:PFM:REP 53->133|PF03099|2e-04|33.3|81/118|BPL_LplA_LipB| RP:PFM:REP 155->227|PF12252|7e-04|37.5|72/1398|SidE| RP:PFM:REP 242->325|PF10437|2e-16|45.2|84/86|Lip_prot_lig_C| HM:PFM:NREP 3 HM:PFM:REP 242->326|PF10437|9.9e-31|48.2|85/86|Lip_prot_lig_C| HM:PFM:REP 43->154|PF03099|5e-25|29.5|112/125|BPL_LplA_LipB| HM:PFM:REP 195->238|PF11199|0.001|31.8|44/326|DUF2891| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF03099|IPR004143| GO:PFM GO:0006464|"GO:protein modification process"|PF03099|IPR004143| RP:SCP:NREP 2 RP:SCP:REP 2->241|1vqzA2|e-105|98.3|240/241|d.104.1.3| RP:SCP:REP 242->329|1vqzA1|1e-28|98.9|88/88|d.224.1.3| HM:SCP:REP 1->241|1vqzA2|4.6e-82|43.6|241/0|d.104.1.3|1/1|Class II aaRS and biotin synthetases| HM:SCP:REP 242->329|1vqzA1|6.5e-26|45.5|88/0|d.224.1.3|1/1|SufE/NifU| OP:NHOMO 658 OP:NHOMOORG 508 OP:PATTERN 111-113333333233----------1---------------------------1111112-111--- ---1-1-1111-2------------------------1------1-1-111-111111--------1-11-1111111---1123---111--1--1--1--------1---------1-----------1---2----11----2----------------------------------------------122222222222222222211222222-1221222222221222323222222221211222-3-11-3---221111111112111222211111111111-1111122222222222221111111111-11--2222222121-311----11--12----11---111-1111-1-1--1--------------------------------1-------------------------------------------------------------------------------------------1----------------------------------------------------------------------1-1-211-11-----11----1-1---------------------------------1111-----1----------------------------1------111-11-1111111111-1111111111111111111111-1--111111111111111111111---1--11111111111111---------------1---1-1-----------------11-------------------111111111----211111-----------------------11------------2-211111-3-22111222121121-----11--------- 11--111-211-111-1111111111111-1--11111-1111111---11-11111-11111111111111111111111111111--1111-111-11111111-121111111-111--1-11-1-845-11111-11111--11-11--111112221111111112-11-1-------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 329 STR:RPRED 100.0 SQ:SECSTR EEEccccTTcHHHHHHHHHHHHHHcTTcccEEEEEccccEEEEcTTccHHHHccTTHHHHHTcEEEEcccccccEEEcTTEEEEEEEEcccccHHHHHHHHHHHHHHHHHHTTcccEEcccccTTcccccTTcEEEEEETTEEEEEEEEEccccHHHHHHHcccTTcccGHHHccccTTTcccGGGTccccccHHHHHHHHHHHHHHHHcEEEEEcccHHHHHHHHHHHHHTTTcHHHHHTTcccEEEEEEEEEEccEEEEEEEEETTEEEEEEEcTTTccHHHHHHHHHHHTTccccHcccTTTccHHHHHHHcTTHHHHHHHTTccc PSIPRED cEEEccccccHHHHHHHHHHHHHHccccccEEEEEEcccEEEEcccccHHHHccHHHHHHccccEEEEcccccEEEEccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccEEEEcccccEEEccEEEEEEEEEEEccEEEEEEEEEEEccHHHHHHHccccccHHHHccccccHHHcccHHHHccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccHHHHccccccEEEEEEccccccEEEEEEEEEccEEEEEEEEcccccHHHHHHHHHHHccccccHHHHHHHHHHccHHHHcccccHHHHHHHHcc //