[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptococcus pneumoniae G54 (spne4)
Gene : nadC
DDBJ      :nadC         Nicotinate-nucleotide pyrophosphorylase
Swiss-Prot:             

Homologs  Archaea  52/68 : Bacteria  682/915 : Eukaryota  150/199 : Viruses  0/175   --->[See Alignment]
c.1.17d.41.2
:290 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->282 1x1oB PDBj 3e-47 45.9 %
:RPS:PDB   1->283 3c2vA PDBj 3e-42 29.8 %
:RPS:SCOP  6->117 1qapA2  d.41.2.1 * 8e-21 33.6 %
:RPS:SCOP  118->283 1o4uA1  c.1.17.1 * 7e-29 31.4 %
:HMM:SCOP  4->117 1qpoA2 d.41.2.1 * 7.3e-31 43.0 %
:HMM:SCOP  118->286 1o4uA1 c.1.17.1 * 1.8e-58 49.1 %
:RPS:PFM   32->116 PF02749 * QRPTase_N 2e-14 50.6 %
:RPS:PFM   118->282 PF01729 * QRPTase_C 2e-38 47.3 %
:HMM:PFM   118->283 PF01729 * QRPTase_C 8.8e-64 51.8 166/169  
:HMM:PFM   26->116 PF02749 * QRPTase_N 8.2e-28 46.0 87/88  
:BLT:SWISS 12->282 NADC_BACSU 5e-52 41.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55736.1 GT:GENE nadC GT:PRODUCT Nicotinate-nucleotide pyrophosphorylase GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(1832269..1833141) GB:FROM 1832269 GB:TO 1833141 GB:DIRECTION - GB:GENE nadC GB:PRODUCT Nicotinate-nucleotide pyrophosphorylase GB:NOTE identified by match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR00078 GB:PROTEIN_ID ACF55736.1 GB:DB_XREF GI:194357288 GB:GENE:GENE nadC LENGTH 290 SQ:AASEQ MSIISTDLTPFQIDDTLKAALREDVHSEDYSTNAIFDHHGQAKVSLFAKEAGVLAGLTVFQRVFTLFDAEVTFQNPHQFKDGDRLTSGDLVLEIIGSVRSLLTCERVALNFLQHLSGIASMTAAYVEALGDDCIKVFDTRKTTPNLRLFEKYAVRVGGGYNHRFNLSDAIMLKDNHIAAVGSVQKAIAQARAYAPFVKMVEVEVESLAAAEEAAAAGADIIMLDNMSLEQIEQAITLIAGRSRIECSGNIDMTTISRFRGLAIDYVSSGSLTHSAKSLDFSMKGLTYLDV GT:EXON 1|1-290:0| BL:SWS:NREP 1 BL:SWS:REP 12->282|NADC_BACSU|5e-52|41.0|268/289| SEG 200->218|veveveslaaaeeaaaaga| BL:PDB:NREP 1 BL:PDB:REP 13->282|1x1oB|3e-47|45.9|268/276| RP:PDB:NREP 1 RP:PDB:REP 1->283|3c2vA|3e-42|29.8|262/270| RP:PFM:NREP 2 RP:PFM:REP 32->116|PF02749|2e-14|50.6|83/88|QRPTase_N| RP:PFM:REP 118->282|PF01729|2e-38|47.3|165/169|QRPTase_C| HM:PFM:NREP 2 HM:PFM:REP 118->283|PF01729|8.8e-64|51.8|166/169|QRPTase_C| HM:PFM:REP 26->116|PF02749|8.2e-28|46.0|87/88|QRPTase_N| GO:PFM:NREP 4 GO:PFM GO:0004514|"GO:nicotinate-nucleotide diphosphorylase (carboxylating) activity"|PF02749|IPR002638| GO:PFM GO:0009435|"GO:NAD biosynthetic process"|PF02749|IPR002638| GO:PFM GO:0004514|"GO:nicotinate-nucleotide diphosphorylase (carboxylating) activity"|PF01729|IPR002638| GO:PFM GO:0009435|"GO:NAD biosynthetic process"|PF01729|IPR002638| RP:SCP:NREP 2 RP:SCP:REP 6->117|1qapA2|8e-21|33.6|110/122|d.41.2.1| RP:SCP:REP 118->283|1o4uA1|7e-29|31.4|156/162|c.1.17.1| HM:SCP:REP 4->117|1qpoA2|7.3e-31|43.0|114/115|d.41.2.1|1/1|Nicotinate/Quinolinate PRTase N-terminal domain-like| HM:SCP:REP 118->286|1o4uA1|1.8e-58|49.1|167/0|c.1.17.1|1/1|Nicotinate/Quinolinate PRTase C-terminal domain-like| OP:NHOMO 954 OP:NHOMOORG 884 OP:PATTERN ---1-1-111111111-11---111111-1-111111111111111111222211111111-----11 11111-111111-111111-11111111111111111111111111111--111111---111-1111111----111--1111111111111111---1-111111111---------------122222322221111111111111111111111111111111111111111111111111-111111111111111111111111111111111111-1111111-11---------------1----------------------------------------111111111111111111111111----------11-111111111-1111221111--1--11111221111111----1-1-1111111-----1111111111111----------1-11111111131-11111111111112111--1----11111111111111-11111111111111-------------------111111111111111111111122111111111212221113111111112111-11111111111111111-111111-111111111111111211111111111111-11-------1111111112211111113111111111111111111111-111111--1111------11111111222122211-11112221211221111111111111111111111111111111112222111111111111111--1111111111111111----1---1-----11111111111111111111111111111111111111111111111111111111111111111111111-111111---------------------------------------111-111111 ----11------21111111111111111111111111111111-1111-1111-11111111111-1-1--11111111111111---21111111111111111-11121211---1-111-11111161---11---1-21--1-1-1--11--11111111--------21111141111111121211111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 283 STR:RPRED 97.6 SQ:SECSTR GGGGcccccEcHHHHHHHHHHHHHccccccHHHHHcccEEEEEEEEEEcccEEcccHHHHHHHHHHTTcEEEEcTTcEEcTTccccccEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcEEEccccccTTTHHHHHHHHHHHTcccccccTTccEEEccccTTccccHHHHHHHHHHHHcTTccEEEEcccHHHHHHHHHHTccEEEccccccEEEEcccHHHHcTTccccccccccccHHHHHTTcccEEEcGGGTTTcccccEEEE####### DISOP:02AL 1-7| PSIPRED cccccccccHHHHHHHHHHHHHcccccccEEEEEEEccccEEEEEEEEccccEEccHHHHHHHHHHHcccEEEEEccccccccccccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHccccccccccccHHEEHHHHHHHHcccHHHHHHHHHHHccccccEEEEEccHHHHHHHHHHcccEEEEccccHHHHHHHHHHHccccEEEEEccccHHHHHHHHHccccEEEEcccccccccEEEEEEEEEEEcc //