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Streptococcus pneumoniae G54 (spne4)
Gene : nanA
DDBJ      :nanA         neuraminidase A
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  50/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
b.29.1b.68.1d.165.1
:942 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   279->755 3h72B PDBj 0.0 98.7 %
:RPS:PDB   203->265,275->366 2agsA PDBj 8e-18 27.5 %
:RPS:PDB   503->681 3a0fA PDBj 4e-09 29.5 %
:RPS:SCOP  83->267 1sliA1  b.29.1.9 * 3e-16 25.3 %
:RPS:SCOP  335->363 1dm0A  d.165.1.2 * 5e-04 13.8 %
:RPS:SCOP  425->748 1eurA  b.68.1.1 * 2e-45 28.1 %
:HMM:SCOP  78->265 2sliA1 b.29.1.9 * 1.3e-28 21.1 %
:HMM:SCOP  286->756 1so7A_ b.68.1.1 * 3.9e-84 36.3 %
:RPS:PFM   115->270 PF02973 * Sialidase 1e-39 61.4 %
:HMM:PFM   80->271 PF02973 * Sialidase 2.3e-74 40.7 189/190  
:HMM:PFM   502->511 PF02012 * BNR 0.00018 80.0 10/12  
:HMM:PFM   569->579 PF02012 * BNR 5.1e-05 63.6 11/12  
:HMM:PFM   907->940 PF00746 * Gram_pos_anchor 2.9e-05 33.3 33/39  
:HMM:PFM   635->705 PF09419 * DUF2010 0.00069 20.6 68/168  
:BLT:SWISS 1->942 NANA_STRR6 0.0 94.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55470.1 GT:GENE nanA GT:PRODUCT neuraminidase A GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(1544100..1546928) GB:FROM 1544100 GB:TO 1546928 GB:DIRECTION - GB:GENE nanA GB:PRODUCT neuraminidase A GB:NOTE identified by match to protein family HMM PF02012; match to protein family HMM PF02973; match to protein family HMM TIGR01167 GB:PROTEIN_ID ACF55470.1 GB:DB_XREF GI:194357022 GB:GENE:GENE nanA LENGTH 942 SQ:AASEQ MIVGAVVFGTSPVLAQEGASEQPLANETQLSGESSTLTDTEKSQPSSETELSGNKQEQERKDKQEEKIPRDYYARDLENVETVIEKEDVETNASNDQRVDLSSELDKLKKLENATVHMEFKPDAKAPAFYNLFSVSSATKKDEYFTMAVYNNTATLEGRGSDGKQFYNNYNDAPLKVKPGQWNSVTFTVEKPTAELPNGRVRLYVNGVLSRTSLKSGNFIKDMPDVTHVQIGATKRANNTVWGSNLQIRNLTVYNRALTPEEVQKRSQLFKRSDLEKKLPEGAALTEKTDIFESGRNGKPNKDGIKSYRIPALLKTDKGTLIAGADERRLHSSDWGDIGMVIRRSEDNGKTWGDRVTITNLRDNPKASDPSIGSPVNIDMVLVQDPETKRIFSIYDMFPEGKGIFGMSSQKEEAYKEIDGKIYQILYREGEKEAYTIRENGTVYTPDGKATDYRVVVDPVKPAYSDKGDLYKGDQLLGNIYFTTNKTSPFRIAKDSYLWMSYSDDDGKTWSAPQDITPMVKADWMKFLGVGPGTGIVLRNGPHKGRILIPVYTTNNVSHLNGSQSSRVIYSDDHGKTWHAGEAVNDNRQVDGQKIHSSTMNNRRAQNTESTVVQLNNGDVKLFMRGLTGDLQVATSKDGGVTWEKDIKRYPQVKDVYVQMSAIHTMHNGKEYIILSNAGGPKRENGMVHLARVEENGELTWLKHNPIQKGEFAYNSLQELGNGEYGILYEHTEKGQNAYTLSFRKFNWDFLSKDLISPTEAKVKRTREMGKGEMGKGVIGLEFDSEVLVNKAPTLQLANGKTATFLTQYDSKTLLFAVDKEDIGQEIIGIAKGSIESMHNLPVNLAGARVPGGVNGSKAAVHEVPEFTGGVNGTEPAVHEIAEYKGSDSLVTLTTKEDYTYKAPLAQQALPETGNKESDLLASLGLTAFFLGLFTLGKKREQ GT:EXON 1|1-942:0| BL:SWS:NREP 1 BL:SWS:REP 1->942|NANA_STRR6|0.0|94.7|937/1035| SEG 55->67|kqeqerkdkqeek| SEG 100->112|dlsseldklkkle| SEG 920->937|llaslgltafflglftlg| BL:PDB:NREP 1 BL:PDB:REP 279->755|3h72B|0.0|98.7|477/477| RP:PDB:NREP 2 RP:PDB:REP 203->265,275->366|2agsA|8e-18|27.5|153/634| RP:PDB:REP 503->681|3a0fA|4e-09|29.5|146/753| RP:PFM:NREP 1 RP:PFM:REP 115->270|PF02973|1e-39|61.4|153/183|Sialidase| HM:PFM:NREP 5 HM:PFM:REP 80->271|PF02973|2.3e-74|40.7|189/190|Sialidase| HM:PFM:REP 502->511|PF02012|0.00018|80.0|10/12|BNR| HM:PFM:REP 569->579|PF02012|5.1e-05|63.6|11/12|BNR| HM:PFM:REP 907->940|PF00746|2.9e-05|33.3|33/39|Gram_pos_anchor| HM:PFM:REP 635->705|PF09419|0.00069|20.6|68/168|DUF2010| GO:PFM:NREP 2 GO:PFM GO:0004308|"GO:exo-alpha-sialidase activity"|PF02973|IPR004124| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF02973|IPR004124| RP:SCP:NREP 3 RP:SCP:REP 83->267|1sliA1|3e-16|25.3|182/196|b.29.1.9| RP:SCP:REP 335->363|1dm0A|5e-04|13.8|29/264|d.165.1.2| RP:SCP:REP 425->748|1eurA|2e-45|28.1|288/361|b.68.1.1| HM:SCP:REP 78->265|2sliA1|1.3e-28|21.1|185/0|b.29.1.9|1/1|Concanavalin A-like lectins/glucanases| HM:SCP:REP 286->756|1so7A_|3.9e-84|36.3|347/0|b.68.1.1|1/1|Sialidases| OP:NHOMO 92 OP:NHOMOORG 55 OP:PATTERN -------------------------------------------------------------------- --1---2-111-1--------------------------------12-----211--------3--2321-----2------------2211-11-----1------1-4-------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-111---22233223232-------------------------------------------22------------------------------2-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------1------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------2 ------1----------------------------------------------------------------------------------------------------------123-----------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 643 STR:RPRED 68.3 SQ:SECSTR ################################################################################################################ccEEEEEEEEcccEEEcEEEEEEEEcTTcccEEEEEEETTEEEEEEEcccccEEEEccccccccccccccEEEEEEEETTEEETETTEEEEEETTEEcTTTTEEcccccccccEEEEEEEcccccccccEcccEEEEEEEEEcccccHHHHHHccTTcEEEEcccccTTcEEEETTTcEEEEcTTccEEEEEccEEEEEEEEEETcTEEEEEEEEEcccccccccEEEEEEEEccTTcccEEEEEEccccccTTccccEEEEEEccTTcTTcEEEEEETTEEEEEccTTcccEEcHTHHHHHcccccccEEEEEEcTTcTTcEEEEETcEEEEEccTTcccEEccTTcccTTcccccccccccEEEEEEEEEccccTTEEEEEETTEEEEETTTTEEEcGGGGcTTTcccEEEEEEccccTccccEEEcTTcTcEEEEEcccccTTcccccccccEEEEccTTcccEEcTTcccccccTTTEEccTcccccccccccTccEEcccccccEEEEcTTcTEcEEEEccTTcccEEHHHHHHHHHcccccccccEEEETccEEEEEEcccccccTTcEEEEEEEccTTcccEEcTTccccccTEEEEEEEcTTccEEEEEEEEccccccTTccTTcHHHHHHHccc########################################################################################################################################################################################### DISOP:02AL 15-30,32-75,846-855,911-914,939-943| PSIPRED cEEEEEEEEEccHHccccccccccccccEEccccccccHHHHcccccccccccccccEEccccccccccccccccHHHccccccccccEEEEcccccEEEEccccHHHccccccEEEEEEEcccccccccEEEEEcccccccEEEEEEEEccEEEEEEEEEcccEEEEEEcccccccccccccEEEEEEEEEEEEccccEEEEEEEEEEEEEEEccccEEEccccccEEEEEEEEEcccEEEccccEEEEEEEEcccccHHHHEEEEEEEEccccccccccccccccccEEEEccEEEEEccccccEEEEEEEEEEccccEEEEEEEccccccccccccEEEEEEcccccccccEEEEEEcccccccccccccccccccEEEEEEccccEEEEEEEEEEccccccccccccccEEEEEccccEEEEEEcccccEEEEEcccEEEcccccEEEEEEEEccEEccccccccccccccccEEEEEEccccccEEEccEEEEEEEEEcccccccccccccccccccccEEEEEccccccEEEEcccccccEEEEEEEEEcccccccccEEEEEEEcccccEEEEcccccccccccccccccccccccccccccEEEEEEcccEEEEEEEcccccEEEEEEccccEEcccccccccccccccEEEEEEEEcccccEEEEEEccccccccccEEEEEEEEccccEEccccEEEccccccccEEEEcccccEEEEEEcccccccEEEEEEEEEcHHHHccccccccccccccccccccccccEEEEEEEEcccccccccccEEcccccEEEEEEEcccccEEEEEEccccccEEEEEEcccHHHHHcccHHHccccccccccccEEEEEccccccccccccccHHccccccccccccccccccccccccccccccccccccccHHHHHHHccHHHHHHHHHHHcccccc //