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Streptococcus pneumoniae G54 (spne4)
Gene : nrdB
DDBJ      :nrdB         ribonucleoside-diphosphate reductase beta subunit
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  416/915 : Eukaryota  82/199 : Viruses  5/175   --->[See Alignment]
a.25.1
:320 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->286 1uzrB PDBj 8e-87 53.9 %
:RPS:PDB   6->297 2bq1I PDBj 8e-55 50.7 %
:RPS:SCOP  6->286 1kgnA  a.25.1.2 * 2e-93 52.7 %
:HMM:SCOP  1->317 1oquC_ a.25.1.2 * 5.6e-104 37.9 %
:RPS:PFM   10->271 PF00268 * Ribonuc_red_sm 1e-42 40.5 %
:HMM:PFM   6->278 PF00268 * Ribonuc_red_sm 1.3e-64 24.3 268/281  
:BLT:SWISS 7->317 RIR2_MYCLE 5e-95 53.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55444.1 GT:GENE nrdB GT:PRODUCT ribonucleoside-diphosphate reductase beta subunit GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 1057182..1058144 GB:FROM 1057182 GB:TO 1058144 GB:DIRECTION + GB:GENE nrdB GB:PRODUCT ribonucleoside-diphosphate reductase beta subunit GB:NOTE identified by match to protein family HMM PF00268 GB:PROTEIN_ID ACF55444.1 GB:DB_XREF GI:194356996 GB:GENE:GENE nrdB LENGTH 320 SQ:AASEQ METYYKAINWNAIEDVIDKSTWEKLTEQFWLDTRIPLSNDLDDWRKLSNKEKDLVGKVFGGLTLLDTMQSETGVQALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKAEIEEIFEWTNTNPYLQKKAEIVNEIYLNGSPLEKKVASVFLETFLFYSGFFTPLYYLGNNKLANVAEIIKLIIRDESVHGTYIGYKFQLGFNELPEEEQEKLKEWMYDLLYTLYENEEGYTESLYDGVGWTEEVKTFLRYNANKALMNMGQDPLFPDSAEDVNPIVMNGISTGTSNHDFFSQVGNGYLLGEVEAMQDDDYNYGLD GT:EXON 1|1-320:0| BL:SWS:NREP 1 BL:SWS:REP 7->317|RIR2_MYCLE|5e-95|53.4|311/325| SEG 208->219|elpeeeqeklke| BL:PDB:NREP 1 BL:PDB:REP 7->286|1uzrB|8e-87|53.9|280/288| RP:PDB:NREP 1 RP:PDB:REP 6->297|2bq1I|8e-55|50.7|292/294| RP:PFM:NREP 1 RP:PFM:REP 10->271|PF00268|1e-42|40.5|257/277|Ribonuc_red_sm| HM:PFM:NREP 1 HM:PFM:REP 6->278|PF00268|1.3e-64|24.3|268/281|Ribonuc_red_sm| GO:PFM:NREP 3 GO:PFM GO:0004748|"GO:ribonucleoside-diphosphate reductase activity"|PF00268|IPR000358| GO:PFM GO:0009186|"GO:deoxyribonucleoside diphosphate metabolic process"|PF00268|IPR000358| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00268|IPR000358| RP:SCP:NREP 1 RP:SCP:REP 6->286|1kgnA|2e-93|52.7|281/296|a.25.1.2| HM:SCP:REP 1->317|1oquC_|5.6e-104|37.9|317/0|a.25.1.2|1/1|Ferritin-like| OP:NHOMO 601 OP:NHOMOORG 503 OP:PATTERN -------------------------------------------------------------------- -----32211122211121-21111222222111111111----112-1---121111--------------111111--1--1----11-1---------11-111---------------------------------------111-11-----------11-------------------11-----11111111111112111211111211111111111111111111111111111111111211111-11-311111111111111111122222221111111111111122222222222221111111111---111111111111-1--11111--11--------------------11---111111111-------------11111111111-----------1-111111-111-----11--1-----1------------1--1----11111-111-1-----------11111-----1111---------------------------------------------------------------------------------------------------11111111111---------1-111-----------1------------------1--------------22111211112122221-111222222212122122111111111111-1111111111-111112222-11111111111111---------------11-----------------------------------------------------1-11------111--11111111111111-------------1--1-11111111---11-11111-11111---------------- ------1-424---1-------------------------------1111111111111111---1111121---1111-12221--------1---------11-11-1--31512---11111--2--------1---1-11111---1--1-11-1------1--1-7--4-1--1-11221---2-1111----- -------1----------------------------------------------------------------------------------------------------------------------1--------------------------------------------111- STR:NPRED 297 STR:RPRED 92.8 SQ:SECSTR HHHHcccccTTccccHHHHHHHHHHTTTcccGGGcccTTcHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHTTTGGGGGGcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHTTHHHHHHHHHHHTTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccTTHHHHHHHHHHHHHHHHHHHHHHHHHHHcTTTccHHHHHHHHHHHHHHHHTTTTccccccTTTccccHHHHHHTcccccccTTTTc####################### DISOP:02AL 1-2| PSIPRED cccccccccccccccHHHHHHHHHHHHccccHHHccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHcccccccccccccccEEEEEEccccccccccccc //