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Streptococcus pneumoniae G54 (spne4)
Gene : nrdD
DDBJ      :nrdD         anaerobic ribonucleoside-triphosphate reductase
Swiss-Prot:             

Homologs  Archaea  15/68 : Bacteria  363/915 : Eukaryota  8/199 : Viruses  8/175   --->[See Alignment]
c.7.1
:735 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   136->701 1hk8A PDBj e-169 52.3 %
:RPS:PDB   137->704 1b8bA PDBj e-152 52.9 %
:RPS:SCOP  1->721 1cm5A  c.7.1.1 * 4e-99 12.8 %
:HMM:SCOP  136->703 1h78A_ c.7.1.3 * 1.1e-194 42.6 %
:RPS:PFM   14->104 PF03477 * ATP-cone 1e-09 35.6 %
:HMM:PFM   596->701 PF01228 * Gly_radical 3.8e-23 18.4 103/106  
:HMM:PFM   15->105 PF03477 * ATP-cone 4.7e-23 40.2 87/89  
:BLT:SWISS 13->726 NRDD_SALTY 0.0 53.8 %
:PROS 691->699|PS00850|GLY_RADICAL_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55993.1 GT:GENE nrdD GT:PRODUCT anaerobic ribonucleoside-triphosphate reductase GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 188255..190462 GB:FROM 188255 GB:TO 190462 GB:DIRECTION + GB:GENE nrdD GB:PRODUCT anaerobic ribonucleoside-triphosphate reductase GB:NOTE identified by match to protein family HMM PF01228; match to protein family HMM PF03477; match to protein family HMM TIGR02487 GB:PROTEIN_ID ACF55993.1 GB:DB_XREF GI:194357545 GB:GENE:GENE nrdD LENGTH 735 SQ:AASEQ MIALEEKITILPTLFVEKRDGRRVVFDVDKIDKALYKAADKVMDVTPLVEKRLNDLTERIITEIHSRFPQGIKIYEIQNIVEHELLEAKEYALAEEYITYRTQRDFERSKATDINFSIHKLLNKDQTVVNENANKDSDVFNTQRDLTAGIVGKSIGLQMLPKHVANAHQKGDIHYHDLDYSPYTPMTNCCLIDFKGMLENGFKIGNAEVESPKSIQTATAQISQIIANVASSQYGGCSADRIDEILAPYAEKNYQKHLKDAEEWVLPEKREDYAWKKTQKDIYDAMQSLEYEINTLFTSNGQTPFTSLGFGLGTSRFEREIQKAILNIRIKGLGSEHRTAIFPKLIFTLKRGLNLEEGTPNYDIKQLALECATKRMYPDVLSYDKIVDLTGSFKVPMGCRSFLQGWKDENGVEVNSGRMNLGVVTVNLPRIALESEGDMNKFWEIFNERMNIAEDALVYRVERTKEATPANAPILYQYGAFGHRLGKEESVDQLFKNRRATVSLGYIGLYEVATVFFGNSWESNPDAKEFTLDIIHDMKRRVEEWSDQYGYHFSIYSTPSESLTDRFCRLDIDKFGSIPDITDKEYYTNSFHYDVRKNPTPFEKLDFEKVYPEAGASGGFIHYCEYPVLQQNPKALEAVWDYAYDRVGYLGTNTPIDRCYKCDFEGDFEPTERGFACPNCGNSDPKTVDVVKRTCGYLGNPQARPMVNGRHKEIAARVKHMNGSTIKIAGHQVTN GT:EXON 1|1-735:0| BL:SWS:NREP 1 BL:SWS:REP 13->726|NRDD_SALTY|0.0|53.8|697/712| PROS 691->699|PS00850|GLY_RADICAL_1|PDOC00665| SEG 82->96|ehelleakeyalaee| SEG 214->227|siqtataqisqiia| BL:PDB:NREP 1 BL:PDB:REP 136->701|1hk8A|e-169|52.3|554/561| RP:PDB:NREP 1 RP:PDB:REP 137->704|1b8bA|e-152|52.9|526/533| RP:PFM:NREP 1 RP:PFM:REP 14->104|PF03477|1e-09|35.6|87/89|ATP-cone| HM:PFM:NREP 2 HM:PFM:REP 596->701|PF01228|3.8e-23|18.4|103/106|Gly_radical| HM:PFM:REP 15->105|PF03477|4.7e-23|40.2|87/89|ATP-cone| RP:SCP:NREP 1 RP:SCP:REP 1->721|1cm5A|4e-99|12.8|670/759|c.7.1.1| HM:SCP:REP 136->703|1h78A_|1.1e-194|42.6|556/0|c.7.1.3|1/1|PFL-like glycyl radical enzymes| OP:NHOMO 408 OP:NHOMOORG 394 OP:PATTERN ----------------1------------1--11111111111------1---1-------------- -------1-------------------------------------------------------1-------11111111122--11-11111-111--------------------------------1--1-11-----------------------------------------------------112---111111111111111--11--111-----11111111--111111111111111111-111-11111111111111111111111111111111111111111211111111111111111111111111122111111111111111122111111-111111111-11111111111-1-------------------1--1-----------------------------------------------------------------11----------------------------------1----1--------------------------11--11------------1--1---11--------------111-112-21111----1-----------2-1---------1------------1---111-------11111111111111111111-------------11111111111111111-111111111111111111111111111111111111111111111111111--111111111111---1-----------------111-111--111---------------------------------------11111111111111--------------------------------1-1------------------1-------1111111-1--- --------------------------------------------------1111--------------------------------2-----------------------------------------------------------------------------------------------------------1-11- ---1---------------1---------------111-1------------------------------------------------------------------------------------------------------------------------1---1---------- STR:NPRED 701 STR:RPRED 95.4 SQ:SECSTR HHHHHHHH##HHHHHHHHHHTcccEEEEEEEcccccccTTT########ccccccccccTTEEEEcGG###GcHHHHHHHHHHTTccccHHHHHH#HHHTccHHHHHHHHccHH###HHHHHHHTcccccTTcccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHTcEEETTTTTTTTccccccEEccHHHHHHccEEETTEEEcccccHHHHHHHHHHHHHHHHTTccccEEEccHHHHcHHHHHHHHHHHHHHHTTTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccTTcccccEEEEEcccccHHHHHHHHHHHHHHHHccTTTTccccccEEEEEEcTTTTccTTcTTHHHHHHHHHHHHHccccEEEEHHHHHHHHcccccccTTTccccccccTTcccccTTccEEEEEEEEHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHHHHHTTTccGGGcHHHHTccTTcccccTTcccHHHHTTTTcEEEEEEEcHHHHHHHHHHHHHc###ETcccHHHHHHHHHHHHHHHHHHHccEEEEEccccTTHHHHHHHHHHHHHcccTTTTccccccccccccTTccccHHHHHHHHHHHHHHHcTTcccccccccccTTcHHHHHHHHHHHHHHccEEcccccEEccEEcccEEEEEEccHHHHHHHcGGGcTGGETcEEccccccccTTccGccHHHHHHHHTccccc############## DISOP:02AL 1-1,729-736| PSIPRED cccHHHHHHcccccEEEEcccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccEEEEcccccccccccccccccHHHHHHcccccccEEEEccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHccccccccEEccEEEEEEEcccccccccccHHHHHHHHHHHHcccccccHHHccccccccccccccccHHHcccccccccEEccccccEEEEEEHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHccccccccccccccHHHHHccccEEEEEEHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHcccEEEcccEEEEEEcccccccHHHHHHHHHHHHccccEEEEccccccccccccccEEEEccccccccccccccccccEEEEEEEEEEcccccccccHHHHHHHHHHHHHcccccEEEccccccc //