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Streptococcus pneumoniae G54 (spne4)
Gene : nth
DDBJ      :nth          endonuclease III
Swiss-Prot:             

Homologs  Archaea  66/68 : Bacteria  872/915 : Eukaryota  170/199 : Viruses  0/175   --->[See Alignment]
a.96.1
:209 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->204 1orpA PDBj 3e-51 47.8 %
:RPS:PDB   3->201 2abkA PDBj 6e-55 37.4 %
:RPS:SCOP  2->201 1ornA  a.96.1.1 * 6e-73 48.0 %
:HMM:SCOP  2->199 1ornA_ a.96.1.1 * 7.6e-64 43.9 %
:RPS:PFM   39->169 PF00730 * HhH-GPD 8e-25 46.6 %
:HMM:PFM   36->172 PF00730 * HhH-GPD 2e-25 40.6 106/121  
:BLT:SWISS 2->203 END3_BACSU 4e-47 45.5 %
:PROS 104->133|PS01155|ENDONUCLEASE_III_2

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF56760.1 GT:GENE nth GT:PRODUCT endonuclease III GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(1149128..1149757) GB:FROM 1149128 GB:TO 1149757 GB:DIRECTION - GB:GENE nth GB:PRODUCT endonuclease III GB:NOTE identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083 GB:PROTEIN_ID ACF56760.1 GB:DB_XREF GI:194358312 GB:GENE:GENE nth LENGTH 209 SQ:AASEQ MVLSKKRARKVLEEIISLFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFVAFPTPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGRKTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEQWLAAHQAMIYFGRAICHPKNPECDQYPQLYDFSNL GT:EXON 1|1-209:0| BL:SWS:NREP 1 BL:SWS:REP 2->203|END3_BACSU|4e-47|45.5|202/219| PROS 104->133|PS01155|ENDONUCLEASE_III_2|PDOC00615| BL:PDB:NREP 1 BL:PDB:REP 2->204|1orpA|3e-51|47.8|203/213| RP:PDB:NREP 1 RP:PDB:REP 3->201|2abkA|6e-55|37.4|198/211| RP:PFM:NREP 1 RP:PFM:REP 39->169|PF00730|8e-25|46.6|131/144|HhH-GPD| HM:PFM:NREP 1 HM:PFM:REP 36->172|PF00730|2e-25|40.6|106/121|HhH-GPD| GO:PFM:NREP 1 GO:PFM GO:0006284|"GO:base-excision repair"|PF00730|IPR003265| RP:SCP:NREP 1 RP:SCP:REP 2->201|1ornA|6e-73|48.0|200/214|a.96.1.1| HM:SCP:REP 2->199|1ornA_|7.6e-64|43.9|198/214|a.96.1.1|1/1|DNA-glycosylase| OP:NHOMO 1800 OP:NHOMOORG 1108 OP:PATTERN 22-111111111111-1121112143343233111111111111111112222111111111111111 2221222222212221111-11111111111112221111211112212---111221--1112111111222221221121122222112112221--21311222121222222222222222212222222312221211131223122121111111112112111111111111111131222111222222222221222222122222222222222222222222222222222222222222222111221-11122112221--1-2222222222222222222222222222222222222222222222212211111111111111111111311112111-11111121121111211212111122222122221122122222222222222-2212211222222222122222222121222221222211111111111111122111111111111111111111111111112212112111211111111111111111111111111112211111222222121221132221222222211111212321233132221311111213211124423111112222222222222221213211222222222222322222222222222222--2211212-11122222222222222222-222222222222222222222222222222222222222222222222222112222222222222122222221111122122222222222222222122222222221111221222222222211111111122112222221111111111111111111111122222211111111111-------------------------1111111111212 11-1131-3121221111-1111111-111111111-------11111111111-11-1111111111112111122-2211111111-1211112111211121211413122224211211212151GG6-213--1-32222-1---21-21321244212221111-1132122293331-3--1-322231322 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 203 STR:RPRED 97.1 SQ:SECSTR #cccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHTTTccHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHTTcTTHHHHHHHHHHHHHHHHHHTTTcccccHHHHHHcTTccHHHHHHHHHHHHccccccccHHHHHHHHHHccccccccHHHHHHHHHHHccGGGTTTHHHHHHHHHHHTcccccccGGGcTTGG##### DISOP:02AL 1-5| PSIPRED ccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccccHHHHHHHHHHHcccccccccHHHHHHHHHHccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccHHHccHHHHHccc //