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Streptococcus pneumoniae G54 (spne4)
Gene : recF
DDBJ      :recF         DNA replication and repair protein RecF
Swiss-Prot:RECF_STRP4   RecName: Full=DNA replication and repair protein recF;

Homologs  Archaea  0/68 : Bacteria  673/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:365 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->325 2o5vA PDBj 6e-28 30.1 %
:RPS:PDB   1->62 1e69A PDBj 2e-05 21.0 %
:RPS:SCOP  1->69 1ii8.1  c.37.1.12 * 5e-13 23.2 %
:HMM:SCOP  1->362 1w1wA_ c.37.1.12 * 6.2e-38 24.5 %
:RPS:PFM   109->314 PF03224 * V-ATPase_H_N 4e-05 31.2 %
:HMM:PFM   3->358 PF02463 * SMC_N 4.4e-18 20.4 196/220  
:BLT:SWISS 1->365 RECF_STRP4 0.0 100.0 %
:PROS 116->136|PS00617|RECF_1
:PROS 305->323|PS00618|RECF_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF56292.1 GT:GENE recF GT:PRODUCT DNA replication and repair protein RecF GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 2062934..2064031 GB:FROM 2062934 GB:TO 2064031 GB:DIRECTION + GB:GENE recF GB:PRODUCT DNA replication and repair protein RecF GB:NOTE identified by match to protein family HMM PF02463; match to protein family HMM TIGR00611 GB:PROTEIN_ID ACF56292.1 GB:DB_XREF GI:194357844 GB:GENE:GENE recF LENGTH 365 SQ:AASEQ MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGSIPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQRNTYLKSDQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKIALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQLKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN GT:EXON 1|1-365:0| SW:ID RECF_STRP4 SW:DE RecName: Full=DNA replication and repair protein recF; SW:GN Name=recF; OrderedLocusNames=SPG_2173; SW:KW ATP-binding; Complete proteome; Cytoplasm; DNA damage; DNA repair;DNA replication; DNA-binding; Nucleotide-binding; SOS response. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->365|RECF_STRP4|0.0|100.0|365/365| GO:SWS:NREP 8 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0006260|"GO:DNA replication"|DNA replication| GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0009432|"GO:SOS response"|SOS response| PROS 116->136|PS00617|RECF_1|PDOC00539| PROS 305->323|PS00618|RECF_2|PDOC00539| SEG 326->339|tisqsiqtfittts| BL:PDB:NREP 1 BL:PDB:REP 3->325|2o5vA|6e-28|30.1|309/358| RP:PDB:NREP 1 RP:PDB:REP 1->62|1e69A|2e-05|21.0|62/263| RP:PFM:NREP 1 RP:PFM:REP 109->314|PF03224|4e-05|31.2|202/299|V-ATPase_H_N| HM:PFM:NREP 1 HM:PFM:REP 3->358|PF02463|4.4e-18|20.4|196/220|SMC_N| GO:PFM:NREP 3 GO:PFM GO:0000221|"GO:vacuolar proton-transporting V-type ATPase, V1 domain"|PF03224|IPR004908| GO:PFM GO:0015986|"GO:ATP synthesis coupled proton transport"|PF03224|IPR004908| GO:PFM GO:0046961|"GO:proton-transporting ATPase activity, rotational mechanism"|PF03224|IPR004908| RP:SCP:NREP 1 RP:SCP:REP 1->69|1ii8.1|5e-13|23.2|69/369|c.37.1.12| HM:SCP:REP 1->362|1w1wA_|6.2e-38|24.5|331/0|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 677 OP:NHOMOORG 673 OP:PATTERN -------------------------------------------------------------------- ----111111111111112-111111111111111111111111111111111111111111111111111111111111111-----111111111--111111111111111111111--2-11111111111111111---111111111111111-111111111111111111111111111122-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111------11111-------------1111111111-------------1111111111111--1--11111---1111111111---111--11-11111111111111111111111-11----11-----------------------------------------------------------------------1--------------1111111111-1-11-----------------------------111111111111111111111111111111--11111------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111---11111111111-1111111111111-11111111111111111111111111111111111111111111111111111111111111111111111--11111111---1-111111-------------------------1----------11 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 314 STR:RPRED 86.0 SQ:SECSTR cEEEEEEEEccTTccccEEEEcccEEEEEccTTTccTHHHHHHHHTcccccTTcccccTTccTTcccEEEEEEEEETTEEEEEEEEEETTEEEEEETTEEEEcGGGHcccccEEEEcTTTTHHHHccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHTT###cGGGTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcc#ccEEEEEEcccc#######TTTHHHHHHHTHHHHHHHTcccccGGGcEEEEEETTEEHHHccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccGGGcccHHHHHHHHH######################################## DISOP:02AL 361-366| PSIPRED cEEEEEEEEccccHHHEEEEccccEEEEEccccccHHHHHHHHHHHHcccccccccHHHHHHccccEEEEEEEEEEcccEEEEEEEEEccccEEEEcccccccHHHHHHHccEEEEccccHHHHHccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEccccHHHHcccHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHccccEEEEcccEEEEccc //