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Streptococcus pneumoniae G54 (spne4)
Gene : recN
DDBJ      :recN         DNA repair protein RecN
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  816/915 : Eukaryota  11/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:555 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->118 1e69A PDBj 2e-06 33.7 %
:BLT:PDB   431->500 2vf8B PDBj 2e-04 34.8 %
:RPS:PDB   5->46,431->504 1e69A PDBj 4e-07 25.7 %
:RPS:PDB   237->327 2a78B PDBj 2e-06 20.5 %
:RPS:SCOP  11->219 1w44A  c.37.1.11 * 9e-26 16.0 %
:RPS:SCOP  362->499 1w1wA  c.37.1.12 * 3e-07 22.4 %
:HMM:SCOP  1->219 1w44A_ c.37.1.11 * 1.2e-68 43.5 %
:RPS:PFM   18->499 PF02463 * SMC_N 3e-11 26.7 %
:HMM:PFM   4->511 PF02463 * SMC_N 2.2e-21 23.2 207/220  
:BLT:SWISS 1->555 RECN_BACSU e-116 41.2 %
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF56301.1 GT:GENE recN GT:PRODUCT DNA repair protein RecN GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(1072772..1074439) GB:FROM 1072772 GB:TO 1074439 GB:DIRECTION - GB:GENE recN GB:PRODUCT DNA repair protein RecN GB:NOTE identified by match to protein family HMM PF02463; match to protein family HMM TIGR00634 GB:PROTEIN_ID ACF56301.1 GB:DB_XREF GI:194357853 GB:GENE:GENE recN LENGTH 555 SQ:AASEQ MXLEISIKNFAIIEAISLNFEKGMTVLTGETGAGKSIIIDAMNMMLGARATTDVIRHGAPKAEIEGLFSVENSRLLQEIFDEQGLELGDEIIIRREILQNGRSISRVNGQMVNLSVLRAIGQHLVDIHGQHDHEELMRPQLHIQMLDEFGDAAFWDLKETYQTSFDAYRKMRKQVLEVKKNQQEHKARIEMLEFQMAEIEAANLQAGEDLDLNQERDKLLNHKNIADTLTNAYSMLDNEDFSSLANVRSAMNDMESVEEYDPEYREISSSLSETYYVLEDISKRLEAIIEDLDFDGNRLMQVENRLDLLHTITRKYGGTVDDVLLYFAKITEEYNLLTGNNLSSEDMEAELKKLEVNLVNLAGQLASARHNLAQQLEAEIKQELQDLYMEKAQFQVRFSKGKFSREGNEMVEFYISTNPGEDFKPLVKVASGGELSRLMLAIKSAFSRKEGKTSIVFDEVDTGVSGRVAQAIAQKIHKIGQYGQVLAISHLPQVIAIADYQFFIEKISNDHSTVSTVRLLTVEERVEEVAKMLAGDDVTEAALTQARELLRNREK GT:EXON 1|1-555:0| BL:SWS:NREP 1 BL:SWS:REP 1->555|RECN_BACSU|e-116|41.2|554/576| COIL:NAA 30 COIL:NSEG 1 COIL:REGION 345->374| SEG 516->529|tvrlltveerveev| BL:PDB:NREP 2 BL:PDB:REP 18->118|1e69A|2e-06|33.7|89/263| BL:PDB:REP 431->500|2vf8B|2e-04|34.8|69/835| RP:PDB:NREP 2 RP:PDB:REP 5->46,431->504|1e69A|4e-07|25.7|116/263| RP:PDB:REP 237->327|2a78B|2e-06|20.5|88/207| RP:PFM:NREP 1 RP:PFM:REP 18->499|PF02463|3e-11|26.7|464/536|SMC_N| HM:PFM:NREP 1 HM:PFM:REP 4->511|PF02463|2.2e-21|23.2|207/220|SMC_N| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF02463|IPR003395| GO:PFM GO:0005694|"GO:chromosome"|PF02463|IPR003395| RP:SCP:NREP 2 RP:SCP:REP 11->219|1w44A|9e-26|16.0|188/304|c.37.1.11| RP:SCP:REP 362->499|1w1wA|3e-07|22.4|137/274|c.37.1.12| HM:SCP:REP 1->219|1w44A_|1.2e-68|43.5|207/0|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 833 OP:NHOMOORG 827 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111-111111111111111111111111111111111111111111111111111111111111111111-111---11111111111--------------111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111121111111111111111111111111111111111111111111112111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111------------1111111111111-----11111111111111111111111111111111111111211111111111111111111111111111111111111111-11111111111111111111111111111-11111111-1--1----11-1-11111111111111111111111111111111--11111------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111--11111111111111111111111111-11111111111111111111111111111111111111111111111111111111211111111111111--11111111---1-111111-------------------------11111-1---111 --------------------------------------------------------------------------------------------------------------------------------------------------------------1--1------------1----111111--------12---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 400 STR:RPRED 72.1 SQ:SECSTR ###HEEEEccTTccccEEEEcccEEEEEccTTTccTHHHHHHHHTcGGGEEEEEcccHHHHHTTccccHHHHHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEEEcccccccEEEEEEccHHHHHTHHHHHHHHTTcccHHHHHHHHHTcccccTTcEEEEEEccHHHHHHHHcccccHHHHHHHHHHHHHTcccccHHHHHHHHHHHcHHHHGHHHHHHHHHHHHHTTTcccHHcGGHHHHHHHHHHHHHHHHHHHHHTTTccTTccHHHHHHHHHHHHHTTcccccccEEEEEEEcGGGGcGGGTTTcccTHH#####################################################################################################cHHHHHHHHHHHHHHHTTTccccEEEEEcccccccHHHHHHHHHHHHHHTTTcEEEEEcccTTGGGGccEEEEE################################################### DISOP:02AL 1-1,178-178,181-185,257-257,421-430,552-556| PSIPRED cccEEEEEEEEEEEEEEEEccccEEEEEccccccHHHHHHHHHHHHcccccHHHHHccccEEEEEEEEEccccHHHHHHHHHcccccccEEEEEEEEEccccEEEEEccEEccHHHHHHHHHHHHHHHccHHHHHHccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccccHHHHHHHccccccccHHHHHHHHccHHHHHHHHHHHHHHcccccccEEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEcHHHHHHccccEEEEEEEEEccEEEEEEEEccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcc //