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Streptococcus pneumoniae G54 (spne4)
Gene : ritR
DDBJ      :ritR         RitR response regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  831/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:229 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->228 2oqrA PDBj 5e-25 33.5 %
:RPS:PDB   4->226 3c3wB PDBj 2e-24 17.0 %
:RPS:SCOP  2->126 1a04A2  c.23.1.1 * 4e-13 20.0 %
:RPS:SCOP  136->229 1ys6A1  a.4.6.1 * 3e-21 44.7 %
:HMM:SCOP  2->122 1zgzA1 c.23.1.1 * 2.9e-19 26.7 %
:HMM:SCOP  126->230 1ys7A1 a.4.6.1 * 8e-24 38.1 %
:RPS:PFM   5->114 PF00072 * Response_reg 3e-07 26.4 %
:RPS:PFM   156->227 PF00486 * Trans_reg_C 4e-12 47.2 %
:HMM:PFM   153->226 PF00486 * Trans_reg_C 3.4e-25 49.3 73/77  
:HMM:PFM   5->114 PF00072 * Response_reg 1.1e-16 25.5 110/112  
:BLT:SWISS 5->228 YKOG_BACSU 1e-35 36.7 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF54888.1 GT:GENE ritR GT:PRODUCT RitR response regulator GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 336111..336800 GB:FROM 336111 GB:TO 336800 GB:DIRECTION + GB:GENE ritR GB:PRODUCT RitR response regulator GB:NOTE Ulijasz et al., J Bacteriol. 2004 186(23):8123-36.; identified by match to protein family HMM PF00072; match to protein family HMM PF00486 GB:PROTEIN_ID ACF54888.1 GB:DB_XREF GI:194356440 GB:GENE:GENE ritR LENGTH 229 SQ:AASEQ MGKRILLLEKERNLAHFLSLELQKEQYRVDLVEEGQKALSMALQTDYDLILLNVNLGDMMAQDFAEKLSRTKPASVIMILDHWEDLQEELEVVQRFAVSYIYKPVFIENLVARISAIFRGRDFIDQHCSLMKVPRTYRNLRIDVEHHTVYRGEEMIALTRREYDLLATLMGSKKVLTREQLLESVWKYESATETNIVDVYIRYLRSKLDVKGQKSYIKTVRGVGYTMQE GT:EXON 1|1-229:0| BL:SWS:NREP 1 BL:SWS:REP 5->228|YKOG_BACSU|1e-35|36.7|221/228| BL:PDB:NREP 1 BL:PDB:REP 5->228|2oqrA|5e-25|33.5|218/226| RP:PDB:NREP 1 RP:PDB:REP 4->226|3c3wB|2e-24|17.0|206/210| RP:PFM:NREP 2 RP:PFM:REP 5->114|PF00072|3e-07|26.4|110/111|Response_reg| RP:PFM:REP 156->227|PF00486|4e-12|47.2|72/77|Trans_reg_C| HM:PFM:NREP 2 HM:PFM:REP 153->226|PF00486|3.4e-25|49.3|73/77|Trans_reg_C| HM:PFM:REP 5->114|PF00072|1.1e-16|25.5|110/112|Response_reg| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 2->126|1a04A2|4e-13|20.0|125/138|c.23.1.1| RP:SCP:REP 136->229|1ys6A1|3e-21|44.7|94/106|a.4.6.1| HM:SCP:REP 2->122|1zgzA1|2.9e-19|26.7|120/0|c.23.1.1|1/1|CheY-like| HM:SCP:REP 126->230|1ys7A1|8e-24|38.1|105/0|a.4.6.1|1/1|C-terminal effector domain of the bipartite response regulators| OP:NHOMO 6433 OP:NHOMOORG 836 OP:PATTERN -------------------------------------------------------------------- 77A4G456778445A9999-9C4478999997EABB6DCB655B6656433586635511FDF6E4DKHG6333333347976131555554-422---21A232B4B78--------------132222214221BCCEE424E4LCI9BB856895568778748EEI54534434434338843323-A5CTTUTUQTSGURVVTPDDA98ATUa7ACP7CA988989XS6AB9A99899AAA9967896A675CC544355566CB554564685CDC655678888888888888555556666665574454455564OGHWNNNRQRSOPIEXRR7DFBLIB6A8DJ62WUD88334526566-28A34566255664A6E998694956866566666558-575668596A31CBBEAA9FEC978A454564B4AB866666666663555462611111111--221122112111111111112672436537IJJKLHA9997IIIHA9AA5EJFI6A8D-1CFE85743C55772CE9233642-------64149775632311152222-A8779685844234515B42532222232222222228856F33855699A5876AADDB5CBDCCCBDCDEBA--22115------8858664999A9AAB99-9BA999999B999999998DCD574446666666756656566788788993-455665575555--1422222333358C4C222111-32331--2876784755666GFFGCHHI7DEFG89AC32121321236A9B7777788AABBB657565554434--31334444---------12-------------------------3743344444452 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1---------1------------4-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 229 STR:RPRED 100.0 SQ:SECSTR EHHEEEEEcccHHHHHHHHHHHHTcTTEEEEEEcHHHHHHHHHHHcccEEEEccEETTEEHHHHHHHHHHHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHGGGccHHHHHHHHHHHETTEEEETTHHHHHHccTTTTccHHHHHHHHHHTHTTccHHHTTccHHHHHHHHTccHHHHHHHHHHHHHHTTcccccHHHHHHHHHTccEcc DISOP:02AL 1-1,122-133| PSIPRED cccEEEEEEccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHccccccccccccccEEEccEEEEcccEEEEEccEEEcccHHHHHHHHHHHHccccccHHHHHHHHcccccccccccHHHHHHHHHHHccccccccEEEEEcccEEEEcc //