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Streptococcus pneumoniae G54 (spne4)
Gene : rnz
DDBJ      :rnz          ribonuclease Z
Swiss-Prot:RNZ_STRP4    RecName: Full=Ribonuclease Z;         Short=RNase Z;         EC=3.1.26.11;AltName: Full=tRNase Z;AltName: Full=tRNA 3 endonuclease;

Homologs  Archaea  67/68 : Bacteria  353/915 : Eukaryota  100/199 : Viruses  0/175   --->[See Alignment]
d.157.1
:309 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->309 2fk6A PDBj 3e-81 48.7 %
:RPS:PDB   1->309 2cbnA PDBj 3e-44 45.1 %
:RPS:SCOP  2->309 1y44A1  d.157.1.7 * 1e-77 49.1 %
:HMM:SCOP  1->309 1y44A1 d.157.1.7 * 1.2e-90 37.8 %
:RPS:PFM   35->78 PF00753 * Lactamase_B 2e-06 47.7 %
:HMM:PFM   28->78 PF00753 * Lactamase_B 9.1e-14 36.0 50/194  
:BLT:SWISS 1->309 RNZ_STRP4 e-177 100.0 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55119.1 GT:GENE rnz GT:PRODUCT ribonuclease Z GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 610367..611296 GB:FROM 610367 GB:TO 611296 GB:DIRECTION + GB:GENE rnz GB:PRODUCT ribonuclease Z GB:NOTE identified by match to protein family HMM PF00753; match to protein family HMM TIGR02651 GB:PROTEIN_ID ACF55119.1 GB:DB_XREF GI:194356671 GB:GENE:GENE rnz LENGTH 309 SQ:AASEQ MDIQFLGTGAGQPSKARNVSSLALKLLDEINEVWLFDCGEGTQNRILETTIRPRKVSKIFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPQGIKSFVLTSLRVSGSRLPYRIHFHEFDQDSLGKILETDKFTVYAEELDHTIFCVGYRVMQKDLEGTLDAKKLKAAGVPFGPLFGKIKNGQDLVLEDGTEIKAADYISAPRPGKIITILGDTRKTDASVRLAVNADVLVHESTYGKGDEKIARNHGHSTNMQAAQVAVEAGAKRLLLNHISARFLSKDISKLKKDAATIFENVHVVKDLEEVEI GT:EXON 1|1-309:0| SW:ID RNZ_STRP4 SW:DE RecName: Full=Ribonuclease Z; Short=RNase Z; EC=3.1.26.11;AltName: Full=tRNase Z;AltName: Full=tRNA 3 endonuclease; SW:GN Name=rnz; OrderedLocusNames=SPG_0615; SW:KW Complete proteome; Endonuclease; Hydrolase; Metal-binding; Nuclease;tRNA processing; Zinc. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->309|RNZ_STRP4|e-177|100.0|309/309| GO:SWS:NREP 5 GO:SWS GO:0004519|"GO:endonuclease activity"|Endonuclease| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0004518|"GO:nuclease activity"|Nuclease| GO:SWS GO:0008033|"GO:tRNA processing"|tRNA processing| BL:PDB:NREP 1 BL:PDB:REP 1->309|2fk6A|3e-81|48.7|304/307| RP:PDB:NREP 1 RP:PDB:REP 1->309|2cbnA|3e-44|45.1|304/306| RP:PFM:NREP 1 RP:PFM:REP 35->78|PF00753|2e-06|47.7|44/171|Lactamase_B| HM:PFM:NREP 1 HM:PFM:REP 28->78|PF00753|9.1e-14|36.0|50/194|Lactamase_B| GO:PFM:NREP 1 GO:PFM GO:0016787|"GO:hydrolase activity"|PF00753|IPR001279| RP:SCP:NREP 1 RP:SCP:REP 2->309|1y44A1|1e-77|49.1|265/269|d.157.1.7| HM:SCP:REP 1->309|1y44A1|1.2e-90|37.8|304/0|d.157.1.7|1/1|Metallo-hydrolase/oxidoreductase| OP:NHOMO 586 OP:NHOMOORG 520 OP:PATTERN 1111111122222221-111111111113111111111111111111111222111111111111111 --1-1--------------------1------11111----------------11-----11---1-1111-----------------11111111---11111111-11111111111111111--------------------11111111111111111111111111111111111111--------111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111--1111111111111-111111111----11-------------------1-------------11--------------------------------------------------------------------------1-------------------------------------111--------------------------------------------------------------------1--------1----1-1------11111--1------------------------1------1----------------------------1---------11-1-111111111111-11-1111111111111111111----12222222222222222-1112221-----------------------------1-----------------111111--11------1----11111-------------------------------1-------------------1111111111--------------------------11------1---- 11----1-1--1--1--------1-1------------------------------------1--------------------------121-2321111121111-1222111111-11111-11111131-1111111111221111111141-11112---21-11--12111-129111221-----122111-3 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 309 STR:RPRED 100.0 SQ:SECSTR cEEEEEEcccccccccccccEEEEEcccccccEEEEcccTTHHHHHHTccccTTTEEEEEcccccHHHHTTHHHHHHHHHHHHTTccccEEEEEcTTHHHHHHHHHHHTTccccccEEEEEccccEEEEEEEcccEEEEEEEcccccccEEEEEEEccccccccHHHHHHTTccccHHHHHHHHTcccEETTTEEccGGGTccccccccEEEEccccccccTHHHHHTTccEEEEEccccGGGHHHHHHTTcccHHHHHHHHHHHTccEEEEEcccTTccHHHHHHHHHHHHTTcccEEEccTTcEEEc PSIPRED cEEEEEEcccccccccccccEEEEEEEccccEEEEEEccHHHHHHHHHccccHHHccEEEEEcccHHHHcccHHHHHHHHHHcccccccEEEEccHHHHHHHHHHHHcccccccccEEEEEccccccccEEEEccEEEEEEEEccccccEEEEEEEcccccEEcHHHHHHcccccHHHHHHHccccEEEEcccEEEcHHHHccccccccEEEEEccccccHHHHHHHccccEEEEEccccccHHHHHHHcccccHHHHHHHHHHccccEEEEEEEcccccHHHHHHHHHHHHHHccccEEccccEEEEc //