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Streptococcus pneumoniae G54 (spne4)
Gene : ruvB
DDBJ      :ruvB         Holliday junction DNA helicase RuvB
Swiss-Prot:RUVB_STRP4   RecName: Full=Holliday junction ATP-dependent DNA helicase ruvB;         EC=3.6.1.-;

Homologs  Archaea  2/68 : Bacteria  889/915 : Eukaryota  17/199 : Viruses  0/175   --->[See Alignment]
a.4.5c.37.1
:332 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   20->327 1ixsB PDBj 2e-92 55.2 %
:RPS:PDB   29->324 2dhrD PDBj 2e-28 17.9 %
:RPS:SCOP  20->254 1hqcA2  c.37.1.20 * 2e-28 55.7 %
:RPS:SCOP  257->328 1hqcA1  a.4.5.11 * 2e-25 48.6 %
:HMM:SCOP  18->255 1in4A2 c.37.1.20 * 5.5e-51 30.3 %
:HMM:SCOP  257->331 1hqcA1 a.4.5.11 * 1.2e-27 53.3 %
:RPS:PFM   12->236 PF05496 * RuvB_N 8e-91 70.7 %
:RPS:PFM   253->326 PF05491 * RuvB_C 1e-23 66.2 %
:HMM:PFM   4->235 PF05496 * RuvB_N 3.7e-116 66.8 232/234  
:HMM:PFM   253->327 PF05491 * RuvB_C 5e-34 57.3 75/76  
:BLT:SWISS 1->332 RUVB_STRP4 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55795.1 GT:GENE ruvB GT:PRODUCT Holliday junction DNA helicase RuvB GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 229193..230191 GB:FROM 229193 GB:TO 230191 GB:DIRECTION + GB:GENE ruvB GB:PRODUCT Holliday junction DNA helicase RuvB GB:NOTE identified by match to protein family HMM PF00004; match to protein family HMM PF05491; match to protein family HMM PF05496; match to protein family HMM PF07728; match to protein family HMM TIGR00635 GB:PROTEIN_ID ACF55795.1 GB:DB_XREF GI:194357347 GB:GENE:GENE ruvB LENGTH 332 SQ:AASEQ MSRILDNEMMGDEELVERTLRPQYLREYIGQDKVKDQLQIFIEAAKMRDEALDHVLLFGPPGLGKTTMAFVIANELGVNLKQTSGPVIEKAGDLVAILNELEPGDVLFIDEIHRLPMSVEEVLYSAMEDFYIDIMIGAGEGSRSVHLELPPFTLIGATTRAGMLSNPLRARFGITGHMEYYAHADLTEIVERTADIFEMEITHEAASELALRSRGTPRIANRLLKRVRDFAQIMGNGVIDDIITDKALTMLDVDHEGLDYVDQKILRTMIEMYSGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRSGRVATAKAYEHLGYEYSEK GT:EXON 1|1-332:0| SW:ID RUVB_STRP4 SW:DE RecName: Full=Holliday junction ATP-dependent DNA helicase ruvB; EC=3.6.1.-; SW:GN Name=ruvB; OrderedLocusNames=SPG_0244; SW:KW ATP-binding; Complete proteome; DNA damage; DNA recombination;DNA repair; Helicase; Hydrolase; Nucleotide-binding; SOS response. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->332|RUVB_STRP4|0.0|100.0|332/332| GO:SWS:NREP 8 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006310|"GO:DNA recombination"|DNA recombination| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0004386|"GO:helicase activity"|Helicase| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0009432|"GO:SOS response"|SOS response| BL:PDB:NREP 1 BL:PDB:REP 20->327|1ixsB|2e-92|55.2|308/315| RP:PDB:NREP 1 RP:PDB:REP 29->324|2dhrD|2e-28|17.9|285/445| RP:PFM:NREP 2 RP:PFM:REP 12->236|PF05496|8e-91|70.7|225/232|RuvB_N| RP:PFM:REP 253->326|PF05491|1e-23|66.2|74/76|RuvB_C| HM:PFM:NREP 2 HM:PFM:REP 4->235|PF05496|3.7e-116|66.8|232/234|RuvB_N| HM:PFM:REP 253->327|PF05491|5e-34|57.3|75/76|RuvB_C| GO:PFM:NREP 7 GO:PFM GO:0006281|"GO:DNA repair"|PF05496|IPR008824| GO:PFM GO:0006310|"GO:DNA recombination"|PF05496|IPR008824| GO:PFM GO:0009378|"GO:four-way junction helicase activity"|PF05496|IPR008824| GO:PFM GO:0003677|"GO:DNA binding"|PF05491|IPR008823| GO:PFM GO:0006281|"GO:DNA repair"|PF05491|IPR008823| GO:PFM GO:0006310|"GO:DNA recombination"|PF05491|IPR008823| GO:PFM GO:0009378|"GO:four-way junction helicase activity"|PF05491|IPR008823| RP:SCP:NREP 2 RP:SCP:REP 20->254|1hqcA2|2e-28|55.7|235/238|c.37.1.20| RP:SCP:REP 257->328|1hqcA1|2e-25|48.6|72/76|a.4.5.11| HM:SCP:REP 18->255|1in4A2|5.5e-51|30.3|238/0|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 257->331|1hqcA1|1.2e-27|53.3|75/76|a.4.5.11|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 994 OP:NHOMOORG 908 OP:PATTERN -------------------------------------------1---1-------------------- 1111111111111111111-111111111111111111111111111111111111111111111111111222222211211--111111222111--1111122111211111111111111111111111111211221111111121112111111111111111111111111111111111111112111111111111111111111111111112111111111111111111111111111111111111111131111111111111111111111111111111111111111111111111111111111121111111111111111221111212111221111111212112222111121111111111112111211111211111111111-112121121111111111111111111111222111212111111112111111111111111111111111111111111111-11211111111111111111111111111111111111111111111111111111111111111111111111111111-2212221111111121121111111112212211111211111111111122111111111211111111111111111111111-11111------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111--11222221111111212111111111-21111111111111111111111111111111111111111121111111111112111111111111111-12111111111111111111---11-21-11111111111111111111112111112 ------------11------------------------------------------------1------1----1--------11-------------1------------13121-1-----------------------------------3-1---------1--------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2,4-14,330-333| PSIPRED ccHHcccccccccHHHHHHHccccHHHHccHHHHHHHHHHHHHHHHHccccccEEEEEccccccHHHHHHHHHHHHcccEEEEcccccccHHHHHHHHHccccccEEEEEcHHHccHHHHHHHHHHHHcEEEEEEEcccccccEEEEccccEEEEEEccccccccHHHHccccEEEEEEEccHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccc //