Synechocystis sp. PCC 6803 (syne0)
Gene : slr0092
DDBJ :slr0092 ORF_ID:slr0092 hypothetical protein
Swiss-Prot:
Homologs Archaea 1/68 : Bacteria 127/915 : Eukaryota 19/199 : Viruses 0/175 --->[See Alignment]
c.68.1
:257 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB 5->105 2z87B PDBj 4e-04 31.6 %
:RPS:PDB 5->195 3bcvA PDBj 1e-19 19.5 %
:RPS:SCOP 5->125 1omxA c.68.1.15 * 2e-14 8.0 %
:HMM:SCOP 1->212 1xhbA2 c.68.1.17 * 1e-29 23.2 %
:RPS:PFM 8->114 PF00535 * Glycos_transf_2 7e-10 31.7 %
:HMM:PFM 8->127 PF00535 * Glycos_transf_2 2.9e-23 28.9 114/169
:BLT:SWISS 5->159 GLTR1_MYCTU 1e-12 33.8 %
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAA10565.1
GT:GENE slr0092
GT:PRODUCT ORF_ID:slr0092 hypothetical protein
GT:DATABASE GIB00004CH01
GT:ORG syne0
GB:ACCESSION GIB00004CH01
GB:LOCATION 2900089..2900862
GB:FROM 2900089
GB:TO 2900862
GB:DIRECTION +
GB:GENE slr0092
GB:NOTE ORF_ID:slr0092 hypothetical protein
GB:PROTEIN_ID BAA10565.1
LENGTH 257
SQ:AASEQ MADRPQLSIIIPVFNEAKILQKSPTENTRQYLGQFTEDQRIEILIIDGGSQDSTVELCQTYADSLPLHVFISPQTGRANQMNYGASLSRSEWLLFLHLDSILPHDFFTQIAEILTNSSYIAGAFGLTIDLPGRPYRWLEKLILWRSIYAQKPYGDQGLFIQRQDFQQLGGFADLPIMEDYQFMQKLGKQRGKVAIAGGKVITSGRRWQKLGLLRTTAINQLVVAGYHLGVSPQTLVHWYRGAKPNRGNRPNSDGTSC
GT:EXON 1|1-257:0|
BL:SWS:NREP 1
BL:SWS:REP 5->159|GLTR1_MYCTU|1e-12|33.8|148/256|
BL:PDB:NREP 1
BL:PDB:REP 5->105|2z87B|4e-04|31.6|95/591|
RP:PDB:NREP 1
RP:PDB:REP 5->195|3bcvA|1e-19|19.5|185/192|
RP:PFM:NREP 1
RP:PFM:REP 8->114|PF00535|7e-10|31.7|101/148|Glycos_transf_2|
HM:PFM:NREP 1
HM:PFM:REP 8->127|PF00535|2.9e-23|28.9|114/169|Glycos_transf_2|
RP:SCP:NREP 1
RP:SCP:REP 5->125|1omxA|2e-14|8.0|113/250|c.68.1.15|
HM:SCP:REP 1->212|1xhbA2|1e-29|23.2|207/0|c.68.1.17|1/1|Nucleotide-diphospho-sugar transferases|
OP:NHOMO 177
OP:NHOMOORG 147
OP:PATTERN --------------------------------------------1----------------------- -----------------11-1-----11111-----------------1-------------------1---------------------1--------1---11---1----------------111111--111111------12221221--1111111111-11211111111111111-------------------------------------------------------------------------------------------------------------------------------------------------1111111-1-------------1-----11--1-------------11-------------1---------------------------1--1---------------11-1------1-1--------------1-------------------------------1---------------1----------------------------------1----1--------------111---121--11-21111-1111-1211------1-----1----------------1---------11---------------------------11-1-------------------------------------------------------------------------------------------------------111-----------------------1---------------------1------------------1-------------------------------------------------------------------11------1- -------------------------------------111111-------------------------------------------------------------------4----------------------------------------------------------------1212D222-2-------11----1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 243
STR:RPRED 94.6
SQ:SECSTR ETTTccEEEEEEEcccTTTHHHHHHHHHHHHHTcccccTcEEEEEEEccccccHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHccccEEEEccTTccccTTHHHHHHHHHTccEEEccEEEccHHHHHHHHGGGTcccHHHHHHHHHHHTcccEEEEHHHHHHTTccTTTcTTHHHHHHHHHHTTcccEEEEcccTTcccccccccccHHHHHHHHHHTTccccccccEEEcccccHHH##############
DISOP:02AL 1-2, 245-257|
PSIPRED ccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHccccccEEEEEEEccccccHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHccccEEEEEEEEEccccccEEHHHHHHHHHHHHcccccccccEEEEHHHHHHccccccccHHHHHHHHHHHHHHccEEEEEcccEEEccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccc
//
[GTOP]
