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Thermobifida fusca YX (tfus0)
Gene : AAZ54107.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  16/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:202 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   30->196 3c2bB PDBj 6e-11 13.8 %
:RPS:SCOP  30->69 2g7sA1  a.4.1.9 * 7e-05 25.0 %
:RPS:SCOP  87->180 1rktA2  a.121.1.1 * 2e-04 23.1 %
:HMM:SCOP  10->85 2fbqA1 a.4.1.9 * 4.1e-13 30.3 %
:HMM:SCOP  84->197 1rktA2 a.121.1.1 * 5e-08 19.3 %
:HMM:PFM   18->63 PF00440 * TetR_N 2.4e-10 37.0 46/47  
:HMM:PFM   51->82 PF05812 * Herpes_BLRF2 0.00047 31.2 32/118  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54107.1 GT:GENE AAZ54107.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 87664..88272 GB:FROM 87664 GB:TO 88272 GB:DIRECTION + GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID AAZ54107.1 GB:DB_XREF GI:71914205 LENGTH 202 SQ:AASEQ MPALQRLSEKTRARREELLDGLRRLFLAEGFARFSVSDMAERLRCSKSTLYLVAPSKEQIVVAAVRSYFKRAAERIEARVAEAPPEKRLVVYLEAVAAELEPVSEQFYADLAAFAPANEVYQENTLVAARRVQELVAEGVAAGVLRPVNAAFVGAAVARVMTGIQDGTIKEATGLDDAEAYRHLADLVMASLTREATESPLA GT:EXON 1|1-202:0| SEG 12->29|rarreelldglrrlflae| SEG 71->83|raaeriearvaea| RP:PDB:NREP 1 RP:PDB:REP 30->196|3c2bB|6e-11|13.8|167/192| HM:PFM:NREP 2 HM:PFM:REP 18->63|PF00440|2.4e-10|37.0|46/47|TetR_N| HM:PFM:REP 51->82|PF05812|0.00047|31.2|32/118|Herpes_BLRF2| RP:SCP:NREP 2 RP:SCP:REP 30->69|2g7sA1|7e-05|25.0|40/74|a.4.1.9| RP:SCP:REP 87->180|1rktA2|2e-04|23.1|91/123|a.121.1.1| HM:SCP:REP 10->85|2fbqA1|4.1e-13|30.3|76/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 84->197|1rktA2|5e-08|19.3|114/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 17 OP:NHOMOORG 16 OP:PATTERN -------------------------------------------------------------------- -----1---------------1----------1---1111-112------------------1-111---1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 173 STR:RPRED 85.6 SQ:SECSTR #############################HHHHccHHHHHHHTTccHHHHHHHTccHHHHHHHHHHHHHTcccccHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHccTTccHHHHHHHHHTTHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHHTTHHHHHTTcccccHHHHHHHHHHHHHHHHccHHHHHHHT DISOP:02AL 1-17, 195-202| PSIPRED cccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccc //