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Thermobifida fusca YX (tfus0)
Gene : AAZ54112.1
DDBJ      :             ABC branched-chain amino acid transporter substrate-binding protein
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  293/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.93.1
:394 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   38->357 3i45A PDBj 3e-19 29.5 %
:RPS:PDB   39->367 3ckmA PDBj 4e-33 17.1 %
:RPS:SCOP  37->351 1usgA  c.93.1.1 * 3e-39 19.0 %
:HMM:SCOP  37->395 1qo0A_ c.93.1.1 * 3.4e-66 29.1 %
:RPS:PFM   77->360 PF01094 * ANF_receptor 5e-12 27.0 %
:HMM:PFM   77->364 PF01094 * ANF_receptor 2e-16 16.4 287/348  
:BLT:SWISS 38->366 LIVB3_BRUME 2e-21 25.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54112.1 GT:GENE AAZ54112.1 GT:PRODUCT ABC branched-chain amino acid transporter substrate-binding protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 94397..95581 GB:FROM 94397 GB:TO 95581 GB:DIRECTION + GB:PRODUCT ABC branched-chain amino acid transporter substrate-binding protein GB:PROTEIN_ID AAZ54112.1 GB:DB_XREF GI:71914210 InterPro:IPR000709 LENGTH 394 SQ:AASEQ MRYPPYAPFAAALCAGALVLTACGSPESAATGDADGPIKIGLVYSMSGPLATYGEQYYQGFEAGLEYATGGTMEVDGRPIEVTTRDDAGDPTKAVSAARELIGEGYDIIAGSTASGVAVQVAPLAEQNKVLFISGPAATDAITGINDYTFRSGRQTYQDILAAGSFMDDPEGKNVIVFAQQNAFGQDNVDAVTTVLEAQGATVDSVLAPPDTTDLTPFAEQVRQADPDLLFVAWAGETASAMWKALNQQGVLDATEVVTGLDIKASYPVFGEAEGKISFLSHYFDGAAQTEAEQMMREFVEDNGGEVDLFTPDGFTAAQMIVHAISEGDTTEERIKALEGWTFEGVKGTLTIRAEDHALLQPMYQVRLVGSGADAVPELIAEIPAADVEPPVAE GT:EXON 1|1-394:0| BL:SWS:NREP 1 BL:SWS:REP 38->366|LIVB3_BRUME|2e-21|25.9|321/368| SEG 4->22|ppyapfaaalcagalvlta| BL:PDB:NREP 1 BL:PDB:REP 38->357|3i45A|3e-19|29.5|315/378| RP:PDB:NREP 1 RP:PDB:REP 39->367|3ckmA|4e-33|17.1|298/309| RP:PFM:NREP 1 RP:PFM:REP 77->360|PF01094|5e-12|27.0|282/319|ANF_receptor| HM:PFM:NREP 1 HM:PFM:REP 77->364|PF01094|2e-16|16.4|287/348|ANF_receptor| RP:SCP:NREP 1 RP:SCP:REP 37->351|1usgA|3e-39|19.0|311/345|c.93.1.1| HM:SCP:REP 37->395|1qo0A_|3.4e-66|29.1|354/0|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 875 OP:NHOMOORG 305 OP:PATTERN -----1--------------111-2---1-11----1---------------------------1--- ----1----------------1----------1111--11-1-2----------------123---1---21---111----2--------------------------------------------1--1--1---1121---22-------11-----1-----1--11------------12-2111----11111111-111111------111-221---------2--------------------------------------------------------------------------------------------2--1-----1------11----1-1--4---1-11121-11------12-------------2ADB--4758A445544544549-45643A2723--A4424475234486---3-32212213--------4----523-----------------------------------6C98C88A7B63222299993343247776855-25548235569D6FH-22----43----------346162-122-131111-3232132-221111--7---1------1----------------11--1--------------------------------------1-3--1-111-1---11-1111---1-11-1111111444---------------------3111---11-111111111111---------------112-------------------------2-1--111-2211122323----------------------11-------------------------------------------------------------11---1--1-2- --------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 341 STR:RPRED 86.5 SQ:SECSTR ###############################EEEccEEcEEEEEccccTTHHHHHHHHHHHHHHHHHHHHcEEcHTTccccEEEEETTccHHHHHHHHHHHHHTTccEEEccccHHHHHHHHHcGGGGTTEEEEccccTTccccTcTTEEEccccHHHHHHHHHHHHHTccTccccEEEEccHHHHHHHHHHHHHHHHHHcccEEEEEccTTHHHHHHHHHHccTTccEEEEccccHHHHHHHHHHTTTcTTcEEEEcGGGccHHHHcHHHHHHTTcEEEEcGGGGccccHHcHHHHHHHHHTTTcHHHHHHHHHHHHHHHHTHHTTccHHHHHHHHcTTccEEETTEEEEEcTTccEEEEEEEEEEEcTTc###################### DISOP:02AL 1-3, 393-394| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEccccHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHcccEEEEEccccccccccccEEEEEcccHHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHHHHHHcccEEEEEEEccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHccccccEEEEEccccHHHHHHcccccccEEEEEccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccEEEEEEccccccccccEEEEEEEEcccccEEEEEEEEcHHHccccccc //