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Thermobifida fusca YX (tfus0)
Gene : AAZ54128.1
DDBJ      :             helix-turn-helix motif
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  14/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:283 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   34->72 2ao9G PDBj 4e-04 10.3 %
:RPS:SCOP  34->87 1b0nA2  a.35.1.3 * 4e-05 24.0 %
:HMM:SCOP  9->72 1y9qA1 a.35.1.8 * 2.4e-10 38.1 %
:HMM:PFM   21->72 PF01381 * HTH_3 2.2e-10 39.2 51/55  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54128.1 GT:GENE AAZ54128.1 GT:PRODUCT helix-turn-helix motif GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 112611..113462 GB:FROM 112611 GB:TO 113462 GB:DIRECTION + GB:PRODUCT helix-turn-helix motif GB:PROTEIN_ID AAZ54128.1 GB:DB_XREF GI:71914226 InterPro:IPR001387 LENGTH 283 SQ:AASEQ MREPSGDYSPTIRRRRLSEELRRLRLARGLTLEQVAEKLEWSRAKIANIETGKRLRPYVTDVELLLNVYGVDDPDQRAALLDLTRQSRTKGWWASYGGLLGDYVGMEAEASSIATYQLGAIPGLLQTFDYAVALAQAMRYPPEDVERIAASRVRRQQLFARKNPPRFHAVIDEAALIRPAAPDRPDVMRAQIHHLINRANDANVTLQLLPFTAGLHAGVSGPFVLLEFPDPADRPVVYLETRAGGHYLEDTAEITEYQDLFTHLHTTALSHEATVARLAQLAE GT:EXON 1|1-283:0| SEG 13->33|rrrrlseelrrlrlargltle| RP:PDB:NREP 1 RP:PDB:REP 34->72|2ao9G|4e-04|10.3|39/106| HM:PFM:NREP 1 HM:PFM:REP 21->72|PF01381|2.2e-10|39.2|51/55|HTH_3| RP:SCP:NREP 1 RP:SCP:REP 34->87|1b0nA2|4e-05|24.0|50/68|a.35.1.3| HM:SCP:REP 9->72|1y9qA1|2.4e-10|38.1|63/0|a.35.1.8|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 198 OP:NHOMOORG 14 OP:PATTERN -------------------------------------------------------------------- ----5-------------------------------C----557----------------IK--M9PLNEC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 39 STR:RPRED 13.8 SQ:SECSTR #################################HHHHHHTccHHHHHHHHHHcHHHHHHHHHHHHHHHHTTH################################################################################################################################################################################################################### DISOP:02AL 1-14| PSIPRED ccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHccccccccHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccEEEEEEEccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEEEEccccccccccccEEEEEccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHc //