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Thermobifida fusca YX (tfus0)
Gene : AAZ54152.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  268/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
d.79.1
:155 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->155 3d01F PDBj 2e-25 49.3 %
:RPS:PDB   5->154 3d01A PDBj 6e-17 40.5 %
:RPS:SCOP  5->154 2otmA1  d.79.1.1 * 5e-43 32.7 %
:HMM:SCOP  12->155 1qu9A_ d.79.1.1 * 4.5e-26 39.3 %
:RPS:PFM   23->151 PF01042 * Ribonuc_L-PSP 1e-04 35.7 %
:HMM:PFM   23->154 PF01042 * Ribonuc_L-PSP 5.7e-24 39.1 115/121  
:BLT:SWISS 131->154 ALDR_LACLA 7e-04 70.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54152.1 GT:GENE AAZ54152.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 138260..138727 GB:FROM 138260 GB:TO 138727 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAZ54152.1 GB:DB_XREF GI:71914250 LENGTH 155 SQ:AASEQ MTTKTPETRLAELGHTLPEVVPPVAAYLPTVRSGSHVYVSGQLPVVGGELRATGKVGADVDPEQAKELAAVCALNAIAAIKAEVGELSRVKRVVKVVGFVASDPSFTGQPQVINGASELFTEVFGEAGKHARSAVGVAVLPLNAPVEVEVIVEVD GT:EXON 1|1-155:0| BL:SWS:NREP 1 BL:SWS:REP 131->154|ALDR_LACLA|7e-04|70.8|24/100| SEG 67->84|elaavcalnaiaaikaev| SEG 89->97|rvkrvvkvv| BL:PDB:NREP 1 BL:PDB:REP 7->155|3d01F|2e-25|49.3|142/155| RP:PDB:NREP 1 RP:PDB:REP 5->154|3d01A|6e-17|40.5|148/155| RP:PFM:NREP 1 RP:PFM:REP 23->151|PF01042|1e-04|35.7|112/119|Ribonuc_L-PSP| HM:PFM:NREP 1 HM:PFM:REP 23->154|PF01042|5.7e-24|39.1|115/121|Ribonuc_L-PSP| RP:SCP:NREP 1 RP:SCP:REP 5->154|2otmA1|5e-43|32.7|150/152|d.79.1.1| HM:SCP:REP 12->155|1qu9A_|4.5e-26|39.3|122/0|d.79.1.1|1/1|YjgF-like| OP:NHOMO 370 OP:NHOMOORG 278 OP:PATTERN ------------------------------------------------------------------11 -111111122211111111-111113111111111112211111111111112121111111112121111-----------1----------1-------2--21-2-----------------11111111111---------1------------------------------------------------------1--1------------1---1----------1-------------------------------------------------------------------------------------------------1--1-1----------------1--21111----11---------1111121111111--11121111111111111112-11211111121-2222553754211221112211111111111111111111111-----------------------------1111-1-11113222241111111411111113134352111112211121213112---------------------------------------------------------------------------------------1---------------1-1---------------------1----------------------------------------------------------------------------------------------------------------1--11-----1111-221-----------------------------------1---------------111111-----------------------------------------------11 --------21------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------2-2221- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 154 STR:RPRED 99.4 SQ:SECSTR #HHHHHHHHHHHHHHHHTTccccccccccEEEETTEEEEEEEccETTTEEccccccTTTccHHHHHHHHHHHHHHHHHHHHHHTTTGGGccEEEEEEEEEEccTTcccHHHHHHHHHHHHHHHHcGGGccEEEEEEEcccGGGccEEEEEEEEcc DISOP:02AL 1-2| PSIPRED cccccHHHHHHHHccccccccccccccccEEEEccEEEEEEEEEEEccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHccccccEEEEHHHHHccccccEEEEEEEEEc //