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Thermobifida fusca YX (tfus0)
Gene : AAZ54153.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  88/915 : Eukaryota  12/199 : Viruses  0/175   --->[See Alignment]
d.113.1
:310 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   46->102 2dsbA PDBj 8e-04 21.1 %
:RPS:SCOP  57->106 1x51A1  d.113.1.3 * 2e-04 26.5 %
:HMM:SCOP  56->265 1nqzA_ d.113.1.1 * 7.5e-18 27.2 %
:HMM:PFM   61->262 PF00293 * NUDIX 1.6e-23 33.8 130/135  
:BLT:SWISS 61->268 NDX7_CAEEL 1e-10 32.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54153.1 GT:GENE AAZ54153.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 138774..139706 GB:FROM 138774 GB:TO 139706 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAZ54153.1 GB:DB_XREF GI:71914251 LENGTH 310 SQ:AASEQ MSANHSECRREEEEKPSSAPVSPSEEATLSEGEVIRHLGSGEITPRMWDVLAGRVTPVRPRDAATVLLVRQADRGLEVYLLRRVASMRFAPGMYAFPGGSVDPRDSDHTIRWSGPPPREWARAFGADEALARALVCAAVRETFEESGVLLAGPSENEVVADTRGDDWEEDRQALLNRSLSLAELLDRRGLVLRSDLLCPWARWITPAMEPRRYDTRFFVAVLPEGQQPRDVGGEADHVTWMSPEEAVRQWRAGQLAMLPPTVANLKSLIGYATPEEVLAAEREIVPVQPEFRKSAGGITLIVPDGVDYPF GT:EXON 1|1-310:0| BL:SWS:NREP 1 BL:SWS:REP 61->268|NDX7_CAEEL|1e-10|32.7|168/295| SEG 11->26|eeeekpssapvspsee| SEG 126->141|adealaralvcaavre| SEG 173->185|allnrslslaell| RP:PDB:NREP 1 RP:PDB:REP 46->102|2dsbA|8e-04|21.1|57/206| HM:PFM:NREP 1 HM:PFM:REP 61->262|PF00293|1.6e-23|33.8|130/135|NUDIX| RP:SCP:NREP 1 RP:SCP:REP 57->106|1x51A1|2e-04|26.5|49/142|d.113.1.3| HM:SCP:REP 56->265|1nqzA_|7.5e-18|27.2|136/187|d.113.1.1|1/1|Nudix| OP:NHOMO 107 OP:NHOMOORG 100 OP:PATTERN -------------------------------------------------------------------- ---1111111111111111-11--12111111111111111111---1----211121--111-1111111---------11-------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-------111---1-111--------------------1-2----------------2----------------------------------------------------------11-------------------------------1111--------11121121-----------------------1---------------------------1---------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----11------11----1---1----------------------------------------------------------------------1----------1----1-------------------------------------------1---------1-------------------------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 57 STR:RPRED 18.4 SQ:SECSTR #############################################EEEEEEEETTccTTcccEEEEEEEEEcTTcccEEEEEEEEETTTTEEEEEccEEEcc################################################################################################################################################################################################################ DISOP:02AL 1-29, 49-59| PSIPRED ccccHHHHHHHHHcccccccccccccccccHHHHHHHHcccccccccccccccccccccccccEEEEEEEccccccEEEEEEEccccccccccEEcccccccccccccccccccccHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHcccEEcHHHHHHHHEEcccccccccHHHHHHHHHccccccccccccHHHHHHcccHHHHHHHHHHcccccccHHHHHHHHHHccccHHHHHHccccccccccEEEEccccEEEEccccccccc //