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Thermobifida fusca YX (tfus0)
Gene : AAZ54160.1
DDBJ      :             anti-sigma factor antagonist
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  99/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.13.2
:117 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->108 1vc1A PDBj 5e-11 29.9 %
:RPS:PDB   3->115 1auzA PDBj 2e-16 21.2 %
:RPS:SCOP  1->108 1vc1A  c.13.2.1 * 1e-17 29.6 %
:HMM:SCOP  3->110 1h4xA_ c.13.2.1 * 5.4e-32 38.9 %
:HMM:PFM   9->108 PF01740 * STAS 1.1e-20 22.0 100/117  
:BLT:SWISS 1->109 RSBV_STRCO 7e-34 72.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54160.1 GT:GENE AAZ54160.1 GT:PRODUCT anti-sigma factor antagonist GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(144979..145332) GB:FROM 144979 GB:TO 145332 GB:DIRECTION - GB:PRODUCT anti-sigma factor antagonist GB:PROTEIN_ID AAZ54160.1 GB:DB_XREF GI:71914258 InterPro:IPR002645 InterPro:IPR003658 LENGTH 117 SQ:AASEQ MDLKLDHHTQDDTEVVVVEGEIDVYTAPRLRELLIDLVNKGHHHLIVNMEKVEFLDSTGLGVLVGGLKRVRAHDGTLDLVCTQERILKIFRITGLTKVFGIYESVQEAIDKRKSKQS GT:EXON 1|1-117:0| BL:SWS:NREP 1 BL:SWS:REP 1->109|RSBV_STRCO|7e-34|72.5|109/113| SEG 59->67|glgvlvggl| BL:PDB:NREP 1 BL:PDB:REP 2->108|1vc1A|5e-11|29.9|107/110| RP:PDB:NREP 1 RP:PDB:REP 3->115|1auzA|2e-16|21.2|113/116| HM:PFM:NREP 1 HM:PFM:REP 9->108|PF01740|1.1e-20|22.0|100/117|STAS| RP:SCP:NREP 1 RP:SCP:REP 1->108|1vc1A|1e-17|29.6|108/110|c.13.2.1| HM:SCP:REP 3->110|1h4xA_|5.4e-32|38.9|108/111|c.13.2.1|1/1|Anti-sigma factor antagonist SpoIIaa| OP:NHOMO 115 OP:NHOMOORG 101 OP:PATTERN ----------------------------------------------11-------------------- ----1-----------------------------------11111--------1------111----1422---------------------------------------1111111-1-----------------11111------1-----11---------------------------------------11111111-111111111111111----111------1--1111111111111111111---------------------------------------------------------------------------1111111-1---11------2--------------------1-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------332222--------------------------------------------11--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 115 STR:RPRED 98.3 SQ:SECSTR ccccccEEEETTEEEEcccccccTTHHHHHHHHHHHHHcccccEEEEEccccccccTTHHHHHHHHHHHHHHHTccccEEcccTTTTHHHHHHccGGGTcccccGGGTGGGTccc## DISOP:02AL 1-3, 115-117| PSIPRED cccEEEEEEEccEEEEEEEccEEHHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHccccEEEccccHHHHHHHHHHccc //