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Thermobifida fusca YX (tfus0)
Gene : AAZ54181.1
DDBJ      :             similar to Transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  102/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:264 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   56->243 3bniA PDBj 1e-34 43.6 %
:RPS:PDB   49->243 3e7qB PDBj 1e-16 12.4 %
:RPS:SCOP  58->128 1z77A1  a.4.1.9 * 4e-13 23.9 %
:HMM:SCOP  54->130 2gfnA1 a.4.1.9 * 2.8e-14 33.8 %
:RPS:PFM   64->110 PF00440 * TetR_N 4e-05 40.4 %
:HMM:PFM   65->109 PF00440 * TetR_N 4.5e-15 46.7 45/47  
:BLT:SWISS 56->187 SLMA_VIBSL 3e-07 25.4 %
:PROS 76->106|PS01081|HTH_TETR_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54181.1 GT:GENE AAZ54181.1 GT:PRODUCT similar to Transcriptional regulator GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(166709..167503) GB:FROM 166709 GB:TO 167503 GB:DIRECTION - GB:PRODUCT similar to Transcriptional regulator GB:PROTEIN_ID AAZ54181.1 GB:DB_XREF GI:71914279 InterPro:IPR001647 LENGTH 264 SQ:AASEQ MTTNSRSSTTRLPAPSSCPTTFTGEEVFPALRNGSAVISPPSLINAPLRRIPSQQRSMARVQRMLDACAELLDEAGYAELTTTKIAERAGVAIGSVYQFFPDKKAITQALGLRYLDIFSARIVRRITEQNFDHWTETVDAIIDEYVTMHREEPGFRFLRFGDAIDPKLLDSTRENNQVIATRLRDLLISLAGAVQSEKLDLAVLVSVEAADAVLKMAFRDDADGDPRLITAAKQLVRSYLEHVFGDEPDTAQELHESTDDRSPA GT:EXON 1|1-264:0| BL:SWS:NREP 1 BL:SWS:REP 56->187|SLMA_VIBSL|3e-07|25.4|130/196| PROS 76->106|PS01081|HTH_TETR_1|PDOC00830| BL:PDB:NREP 1 BL:PDB:REP 56->243|3bniA|1e-34|43.6|172/174| RP:PDB:NREP 1 RP:PDB:REP 49->243|3e7qB|1e-16|12.4|194/210| RP:PFM:NREP 1 RP:PFM:REP 64->110|PF00440|4e-05|40.4|47/47|TetR_N| HM:PFM:NREP 1 HM:PFM:REP 65->109|PF00440|4.5e-15|46.7|45/47|TetR_N| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00440|IPR001647| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00440|IPR001647| RP:SCP:NREP 1 RP:SCP:REP 58->128|1z77A1|4e-13|23.9|71/75|a.4.1.9| HM:SCP:REP 54->130|2gfnA1|2.8e-14|33.8|77/0|a.4.1.9|1/1|Homeodomain-like| OP:NHOMO 145 OP:NHOMOORG 102 OP:PATTERN -------------------------------------------------------------------- 11--1-1-------1---------11------1111-2-------------1--------111-3112132---------------------------------------------------------------------------1-1311--------------222--------------------------------------------------------------------------------------------------------------------------------------------------------------1-----1---------------------------------------1--3121-------2------21-1----------1--------1-33-3--132-222-----2----------------------11-1---------------------------------1--------2232------1111------2-2--------1---------1--1----1---------------22-1------------------------12---------------------------11-1--1---------------------------------------2----------------------------------------1------------------1-------1---------------------------11------------------1111-1-----1111-1---------1-------------------------------------------2211--------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 252 STR:RPRED 95.5 SQ:SECSTR #######ccHHHHHHHHHHHHHTTEEEEEEEE##EcHHHHHHHHHTccccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHTccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHTccccHHHHHHHHHHHHTcHHHHcGGGHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcTTcccHHHHHHHHHHHHHHHHHHHTTTTcccHcccHHH### DISOP:02AL 1-19, 25-63, 248-264| PSIPRED cccccccccccccccccccccccHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccHHHHcccccccccc //