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Thermobifida fusca YX (tfus0)
Gene : AAZ54214.1
DDBJ      :             putative short chain dehydrogenase
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  510/915 : Eukaryota  62/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:240 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   55->181 1xr3B PDBj 2e-13 38.1 %
:RPS:PDB   20->185 1dohB PDBj 8e-17 19.3 %
:RPS:SCOP  30->193 1a27A  c.2.1.2 * 8e-16 22.2 %
:HMM:SCOP  2->214 1zemA1 c.2.1.2 * 4.9e-35 34.5 %
:HMM:PFM   2->155 PF00106 * adh_short 2.1e-19 30.8 133/167  
:BLT:SWISS 34->186 UCPA_SALTY 2e-16 34.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54214.1 GT:GENE AAZ54214.1 GT:PRODUCT putative short chain dehydrogenase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(199389..200111) GB:FROM 199389 GB:TO 200111 GB:DIRECTION - GB:PRODUCT putative short chain dehydrogenase GB:PROTEIN_ID AAZ54214.1 GB:DB_XREF GI:71914312 InterPro:IPR002198 InterPro:IPR002347 LENGTH 240 SQ:AASEQ MLVARSADRLAALAAELTDRYGVPAQCLPADLTDDKDLATVEERLRVTGDTADAPIDLLVNNAGQAHGGDFATIPVSAIEDTLALNIRALTRLAHAVLPVQIERARQLREAGSSRPLGMINVASMAGLLPAAPGGAVYSASKAYVLSLTDTLAVEAARHGVRVTAVLPGYVRTDMTRSLQEKGAPDIAFVPRERVVTDSLRGWASGRTRVVPGAQYKAVNALLHALPPGLFHAVAKRTSA GT:EXON 1|1-240:0| BL:SWS:NREP 1 BL:SWS:REP 34->186|UCPA_SALTY|2e-16|34.5|142/263| SEG 2->17|lvarsadrlaalaael| SEG 126->136|agllpaapgga| BL:PDB:NREP 1 BL:PDB:REP 55->181|1xr3B|2e-13|38.1|118/254| RP:PDB:NREP 1 RP:PDB:REP 20->185|1dohB|8e-17|19.3|150/271| HM:PFM:NREP 1 HM:PFM:REP 2->155|PF00106|2.1e-19|30.8|133/167|adh_short| RP:SCP:NREP 1 RP:SCP:REP 30->193|1a27A|8e-16|22.2|153/285|c.2.1.2| HM:SCP:REP 2->214|1zemA1|4.9e-35|34.5|197/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 1314 OP:NHOMOORG 576 OP:PATTERN ---------------------1--1--2--1------------------------------------- 113-6-1----2-233333-34114433333599A95577123441311---2212-2--54122132313--------1214-----1111-111-----2---522-1---------------1-112111111322-------32113312311-------1124441---1-----1--11122---3-12222213121312222311111112331121-1111-21-111-11-11111112--12--11--11----------1-11----222-111----------------------------11---111-1-1122222222-1---11-----1---12----------1-1---11---1-6665-----536572213643411111111112-66366765651-A666218576653621421-2112--211111111243-11-1------------------------------32241333296445442222144452222123353A97--3331-1215213521231--2------------211-1-------------12--1-1-1-11153-------------------------------11---13-11---1-2-111-------1-------------22253513222333323-223232323322333333146412--2312222222221212232222223--255555555555----11111-----1122---1-1-----1-1-1111112---2-4524246132221-222----------1225-----12-12211111-222------1-111211--------1---------------------------21-1--1----31 -1----1---1-111--2-1121222211----1---111121111-----112-------1----------------------------31--1--------332--2------1----1-------------------------------------211-21-11--45-2-1----------11121211-3-21- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 218 STR:RPRED 90.8 SQ:SECSTR #################EHHTTccEEEEEccTTcHHHHHHHHHHHHHHHccTcEcccEEEEcccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHccTTcEEEcHHHHHccHEEEEccGGcGTcccccccHHHHHHHHHHHHHHHHHHHHHGGGTcEEEEEEEcccccHHHHHHGGGGcTHHHHccHHHHHHHHHHHHHTTccEEEEcccHHHHccTTccccccTTcccc##### DISOP:02AL 239-240| PSIPRED ccccccHHHHHHHHHHHHHHcccEEEEEEEccccHHHHHHHHHHHHHHHHHHHccEEEEEEcccccccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHccHHHHHHHHcccHHHHHHHHHHHHHccccEEEccHHHHHHHHHHHHHcHHHHHHHHHHHcc //