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Thermobifida fusca YX (tfus0)
Gene : AAZ54236.1
DDBJ      :             Heat shock protein DnaJ
Swiss-Prot:             

Homologs  Archaea  26/68 : Bacteria  910/915 : Eukaryota  197/199 : Viruses  2/175   --->[See Alignment]
a.2.3b.4.1g.54.1
:404 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   36->98 2dn9A PDBj 4e-19 57.1 %
:BLT:PDB   184->247 1exkA PDBj 4e-16 48.4 %
:BLT:PDB   293->394 3i38K PDBj 1e-14 40.4 %
:RPS:PDB   17->101 2ctqA PDBj 6e-24 24.7 %
:RPS:PDB   184->403 1cmwA PDBj 7e-38 14.6 %
:RPS:SCOP  34->99 1bq0A  a.2.3.1 * 8e-23 62.1 %
:RPS:SCOP  182->249 1exkA  g.54.1.1 * 5e-13 45.6 %
:RPS:SCOP  296->381 1c3gA2  b.4.1.1 * 8e-25 26.7 %
:HMM:SCOP  34->150 1gh6A_ a.2.3.1 * 3.4e-27 50.9 %
:HMM:SCOP  155->294 1c3gA1 b.4.1.1 * 6.7e-21 45.0 %
:HMM:SCOP  295->382 1c3gA2 b.4.1.1 * 3.1e-22 42.0 %
:RPS:PFM   36->97 PF00226 * DnaJ 3e-20 64.5 %
:RPS:PFM   182->244 PF00684 * DnaJ_CXXCXGXG 4e-12 50.8 %
:RPS:PFM   283->373 PF01556 * DnaJ_C 1e-20 47.3 %
:HMM:PFM   151->179 PF01556 * DnaJ_C 0.00086 31.0 29/101  
:HMM:PFM   247->290 PF01556 * DnaJ_C 1.2e-07 39.5 43/101  
:HMM:PFM   282->379 PF01556 * DnaJ_C 6.4e-31 44.9 98/101  
:HMM:PFM   36->98 PF00226 * DnaJ 1.5e-30 66.7 63/64  
:HMM:PFM   171->244 PF00684 * DnaJ_CXXCXGXG 2.1e-17 32.4 74/79  
:BLT:SWISS 27->394 DNAJ2_PROAC 4e-96 50.5 %
:PROS 78->97|PS00636|DNAJ_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54236.1 GT:GENE AAZ54236.1 GT:PRODUCT Heat shock protein DnaJ GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 224240..225454 GB:FROM 224240 GB:TO 225454 GB:DIRECTION + GB:PRODUCT Heat shock protein DnaJ GB:PROTEIN_ID AAZ54236.1 GB:DB_XREF GI:71914334 InterPro:IPR001623 InterPro:IPR003095 LENGTH 404 SQ:AASEQ MSQARAWDTRLSHHWAQSTSGEKQTSMSTKDYLEKDYYKVLGVSKTATADEIRSAYRKLARKYHPDANKGDAQAEKKFKEISEAYSVLSDEKRRKEYDEARSLFGGAYRPGGGGIGDFNLGDLFGHTTTGGERLTDLFGGLFGGRGRATQSRRGADLETETTLSFTEAVSGTTKSFTLTTTVSCPTCRGSGAKPGTTPRVCPRCAGTGHESTNLGGFSLSEPCALCKGRGYLADDPCLTCSGTGNVKGTRTVQARIPPGVSDGQRIRLRGKGEPGERGGPAGDLFVTVRVTPHPVFGRSGDNLTLTLPVTFPEAVFGAEVRVPTLSGPPVTVRIPPGTRNGRVFRVRGKGATRRDGTTGDLLVTVEVAVPQNLNSEAREALQRFQAATADHNPRADLEARAKGA GT:EXON 1|1-404:0| BL:SWS:NREP 1 BL:SWS:REP 27->394|DNAJ2_PROAC|4e-96|50.5|368/380| PROS 78->97|PS00636|DNAJ_1|PDOC00553| SEG 105->125|ggayrpggggigdfnlgdlfg| SEG 137->147|lfgglfggrgr| SEG 172->181|ttksftlttt| SEG 269->282|rgkgepgerggpag| BL:PDB:NREP 3 BL:PDB:REP 36->98|2dn9A|4e-19|57.1|63/79| BL:PDB:REP 184->247|1exkA|4e-16|48.4|64/79| BL:PDB:REP 293->394|3i38K|1e-14|40.4|99/103| RP:PDB:NREP 2 RP:PDB:REP 17->101|2ctqA|6e-24|24.7|85/112| RP:PDB:REP 184->403|1cmwA|7e-38|14.6|206/817| RP:PFM:NREP 3 RP:PFM:REP 36->97|PF00226|3e-20|64.5|62/63|DnaJ| RP:PFM:REP 182->244|PF00684|4e-12|50.8|63/78|DnaJ_CXXCXGXG| RP:PFM:REP 283->373|PF01556|1e-20|47.3|91/95|DnaJ_C| HM:PFM:NREP 5 HM:PFM:REP 151->179|PF01556|0.00086|31.0|29/101|DnaJ_C| HM:PFM:REP 247->290|PF01556|1.2e-07|39.5|43/101|DnaJ_C| HM:PFM:REP 282->379|PF01556|6.4e-31|44.9|98/101|DnaJ_C| HM:PFM:REP 36->98|PF00226|1.5e-30|66.7|63/64|DnaJ| HM:PFM:REP 171->244|PF00684|2.1e-17|32.4|74/79|DnaJ_CXXCXGXG| GO:PFM:NREP 6 GO:PFM GO:0031072|"GO:heat shock protein binding"|PF00226|IPR001623| GO:PFM GO:0006457|"GO:protein folding"|PF00684|IPR001305| GO:PFM GO:0031072|"GO:heat shock protein binding"|PF00684|IPR001305| GO:PFM GO:0051082|"GO:unfolded protein binding"|PF00684|IPR001305| GO:PFM GO:0006457|"GO:protein folding"|PF01556|IPR002939| GO:PFM GO:0051082|"GO:unfolded protein binding"|PF01556|IPR002939| RP:SCP:NREP 3 RP:SCP:REP 34->99|1bq0A|8e-23|62.1|66/77|a.2.3.1| RP:SCP:REP 182->249|1exkA|5e-13|45.6|68/79|g.54.1.1| RP:SCP:REP 296->381|1c3gA2|8e-25|26.7|86/90|b.4.1.1| HM:SCP:REP 34->150|1gh6A_|3.4e-27|50.9|106/0|a.2.3.1|1/1|Chaperone J-domain| HM:SCP:REP 155->294|1c3gA1|6.7e-21|45.0|80/80|b.4.1.1|1/2|HSP40/DnaJ peptide-binding domain| HM:SCP:REP 295->382|1c3gA2|3.1e-22|42.0|88/90|b.4.1.1|2/2|HSP40/DnaJ peptide-binding domain| OP:NHOMO 5409 OP:NHOMOORG 1135 OP:PATTERN ------------------------11111111111--------2212211211--------111--22 2222322222222222222-22222222222222222253233322222222222232222222322322222222223222322222222212111112321323323211111111111111111111111121333332222344643366533333334634455662433222323312212211221111111111111111111111111111121221111112111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111121112111111121111111111211221241222212212111112113222222422222233232222222222222222222124223232223142223343333322222112111111122222222222222331111111111111111111111111111112233222222211112211111134111111113232222221211222223213343112112222222222324233232322222222222323222222223562212222222222222222222222222111212122311111122111111111111-1221211111121111112222222222-22222222222222222222221111222222222222222222222222211211111111111111122222322322223111121111-11111222321222221111122221222212222222222223222111111111112222222222222211221111112221221221111111-11111631111113111111111111121221 QE9AHFG-rIK4ILI9EBCDGEGCD9DBA9BBCDFEDFEEAFEDDEEDFDEDDECBC9CBCCCCBAAA59AADAC9B5AABA9C99DE-CHDECDDA46C89FKHE1EnBdincYZMJFBDFNEiXCYB**X1bTcEIADd9JXODGGGEOEEdGJNOOGLHFLJGCgJLWCERCAQIM*GG9EGeZdzGpXIHNKSPS --------------------------------------------------------------------------------------------------------------------------------------------------------------------------2--1- STR:NPRED 384 STR:RPRED 95.0 SQ:SECSTR ################ccccccccccccccccccccHHHHTTccTTccHHHHHHHHHHHHHTTcTTTcTTccTHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcGGGHHHHHHHHHcTTcc###TTTTcEEEEEETTccEEEccccccccHHHccccccccccccccccccccTTccccccEEHHHTTTTTTTTTTTccHHHHHHHHHHHHHHHHHHTccTTTcccTTTcccccEEEcccccccccEEEcccGGGccTTcHHHHHHHHTccccTTEEEEEEEETTHHHHHHHHHHTcHHHHHHHHHEcccHHHHHHTccHHHHHHHHcHHTccGGGccHHTcEHHHHHHHHHHHTTcccHHHHHHHccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHTc# DISOP:02AL 1-34, 104-116, 138-158, 187-211, 383-404| PSIPRED cccHHHHHHHHHccccccccHHHHHHHHHHHHHHcccHHHccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccEEEEEEEcHHHHccccEEEEEEcccEEccccccccccccccEEEcccccccccEEEcccEEEEEEEEccccccccEEEEcccccccEEEEEccEEEEEEEccccccccEEEEEccccccccccccccEEEEEEEEcccccEEcccEEEEEEEccHHHHHcccEEEEEcccccEEEEEEccccccccEEEEccccEEccccccccEEEEEEEEEcccccHHHHHHHHHHHHHHccccccccHHHHHccc //