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Thermobifida fusca YX (tfus0)
Gene : AAZ54245.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  43/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.118.8a.4.6c.37.1
:453 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->235 2ff4B PDBj 6e-30 35.2 %
:RPS:PDB   107->210 3ceqB PDBj 5e-04 13.3 %
:RPS:PDB   276->416 2a5yC PDBj 4e-05 12.8 %
:RPS:SCOP  24->74 2fezA1  a.4.6.1 * 1e-05 45.1 %
:RPS:SCOP  125->222 1fchA  a.118.8.1 * 9e-07 17.3 %
:RPS:SCOP  277->416 2a5yB3  c.37.1.20 * 5e-04 19.9 %
:HMM:SCOP  1->86 2ff4A1 a.4.6.1 * 2.1e-09 31.4 %
:HMM:SCOP  87->264 2ff4A2 a.118.8.3 * 5.1e-41 40.4 %
:HMM:SCOP  260->416 1w5sA2 c.37.1.20 * 9.8e-15 23.5 %
:RPS:PFM   111->235 PF03704 * BTAD 5e-20 51.2 %
:RPS:PFM   348->414 PF00931 * NB-ARC 1e-05 37.3 %
:HMM:PFM   92->236 PF03704 * BTAD 2.6e-48 49.7 145/146  
:HMM:PFM   282->416 PF00931 * NB-ARC 1.6e-12 24.6 130/285  
:HMM:PFM   20->78 PF00486 * Trans_reg_C 5e-11 29.3 58/77  
:BLT:SWISS 41->423 AFSR_STRGR 1e-55 41.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54245.1 GT:GENE AAZ54245.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(234281..235642) GB:FROM 234281 GB:TO 235642 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID AAZ54245.1 GB:DB_XREF GI:71914343 InterPro:IPR001867 LENGTH 453 SQ:AASEQ MLGPLQVEGPSGPIRIPPGRQRIVLAALLLEVNRQVSTDYLVDAIWEHDPPETARTQVQICVSRLRRLLAPTGAAIETRTPNYLLRVNPLTVDAQVYSQRVDEARDLSNHGRISEAAALLRSAAGLWNGPALDGVPSRILRAKAARLDEDRLTTIETYLDLELQLGRHSQLIGEITELVEQHPLRERLRSQLMLALYRSGRQAEALEVYRTGRELLIKELGLEPGDELRSLEAAILAGDPALRPADPPAPAAPPEPPPSSPTRGVTPYQLPTDTADFVGRTEALETIRTTLLNSDGAVGVAVLLGRPGVGKSATAVHAAHQLAADHYPDGQLYCDLRASRGAPLPPSDILGRFLRALGVPGQAIPDDPDERAAMYRGLLATRRVLVVLDDAVSESQVLPLIPGGRGCGVIITSRSRLTGIPGATCLRARLTSSSTGFRGGRSPAVQPVQRRCR GT:EXON 1|1-453:0| BL:SWS:NREP 1 BL:SWS:REP 41->423|AFSR_STRGR|1e-55|41.4|372/974| SEG 9->23|gpsgpirippgrqri| SEG 236->261|lagdpalrpadppapaappepppssp| SEG 313->326|atavhaahqlaadh| SEG 431->442|tssstgfrggrs| BL:PDB:NREP 1 BL:PDB:REP 1->235|2ff4B|6e-30|35.2|233/373| RP:PDB:NREP 2 RP:PDB:REP 107->210|3ceqB|5e-04|13.3|98/269| RP:PDB:REP 276->416|2a5yC|4e-05|12.8|141/373| RP:PFM:NREP 2 RP:PFM:REP 111->235|PF03704|5e-20|51.2|125/142|BTAD| RP:PFM:REP 348->414|PF00931|1e-05|37.3|67/241|NB-ARC| HM:PFM:NREP 3 HM:PFM:REP 92->236|PF03704|2.6e-48|49.7|145/146|BTAD| HM:PFM:REP 282->416|PF00931|1.6e-12|24.6|130/285|NB-ARC| HM:PFM:REP 20->78|PF00486|5e-11|29.3|58/77|Trans_reg_C| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00931|IPR002182| GO:PFM GO:0006915|"GO:apoptosis"|PF00931|IPR002182| RP:SCP:NREP 3 RP:SCP:REP 24->74|2fezA1|1e-05|45.1|51/95|a.4.6.1| RP:SCP:REP 125->222|1fchA|9e-07|17.3|98/302|a.118.8.1| RP:SCP:REP 277->416|2a5yB3|5e-04|19.9|136/275|c.37.1.20| HM:SCP:REP 1->86|2ff4A1|2.1e-09|31.4|86/0|a.4.6.1|1/1|C-terminal effector domain of the bipartite response regulators| HM:SCP:REP 87->264|2ff4A2|5.1e-41|40.4|178/0|a.118.8.3|1/1|TPR-like| HM:SCP:REP 260->416|1w5sA2|9.8e-15|23.5|153/0|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 209 OP:NHOMOORG 43 OP:PATTERN -------------------------------------------------------------------- ----Y----------2333-31--312322212111312--64E14------1-------B72-P5C98I1-----------------------------------------------------------------111-----1-1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 380 STR:RPRED 83.9 SQ:SECSTR cccccEEEETTEEcccccHHHHHHHHHHHHTTTccEEHHHHHHHHHTTcccTTHHHHHHHHHHHHHHHHG##GGTccHHHTEEEEcccGGGccHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHHccccccHHcccHHHHHHHHHHHHHHTTcccccccccccTTHHHHTTccccHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHH##################################TccccccccccHHHHHHHHHHHHHTTccccEEEEEEcTTccHHHHHHHHHHccTTTcTTTccEEEEEEccccccTHHHHHHHHHHHHccHHHHHHccccccccHHHHHHHHHHHTTccccEEEEEEcHHHHHHHHTTcEEEEEEccG##################################### DISOP:02AL 438-442, 444-448| PSIPRED ccccEEEEEccEEEccccHHHHHHHHHHHHcccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccEEEEccccEEEEccccEEcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccEEEEEEccccccHHHHHHHHHHHHHHHcccccEEEEEccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHccccccEEEEEEccHHHccccccccccccccccHHHHHcccccccHHHHHcc //