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Thermobifida fusca YX (tfus0)
Gene : AAZ54297.1
DDBJ      :             ribokinase, bacterial
Swiss-Prot:             

Homologs  Archaea  9/68 : Bacteria  450/915 : Eukaryota  74/199 : Viruses  0/175   --->[See Alignment]
c.72.1
:295 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->295 1rkdA PDBj 6e-28 32.8 %
:RPS:PDB   3->295 2c4eA PDBj 2e-33 17.2 %
:RPS:SCOP  4->295 2fv7A1  c.72.1.1 * 3e-42 28.4 %
:HMM:SCOP  1->291 1dgmA_ c.72.1.1 * 1e-80 42.4 %
:RPS:PFM   7->284 PF00294 * PfkB 2e-19 37.4 %
:HMM:PFM   4->288 PF00294 * PfkB 7.6e-67 38.4 279/300  
:BLT:SWISS 5->293 RBSK_BACSU 2e-32 36.3 %
:PROS 240->253|PS00584|PFKB_KINASES_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54297.1 GT:GENE AAZ54297.1 GT:PRODUCT ribokinase, bacterial GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 290106..290993 GB:FROM 290106 GB:TO 290993 GB:DIRECTION + GB:PRODUCT ribokinase, bacterial GB:PROTEIN_ID AAZ54297.1 GB:DB_XREF GI:71914395 InterPro:IPR002139 InterPro:IPR002173 InterPro:IPR011877 LENGTH 295 SQ:AASEQ MAPRIAVFGSVNMDLVAYVDTPPARGETVQGRQFSQVPGGKGANQAIAAARAGADVVFLGAVGDDVFGPQLRATLVDNGIDVSGLRTVGGASGIAHIVVDREGNNSIIVIPGANGTVTGLRENDTLLLDGAQALLLQLETPLSGVIAAARAGRSLGVTTVLTPAPAQPLPQELLECVDVLLPNQYEAATITGEDTPERALAALLETVPEVIITLGSRGALYGARDREPLWVPVVQVEAVDTTGAGDTFCGAYAVARTEGQDPESALRFAAKAAALSVRIPGASTSMPTRAEIDAF GT:EXON 1|1-295:0| BL:SWS:NREP 1 BL:SWS:REP 5->293|RBSK_BACSU|2e-32|36.3|284/293| PROS 240->253|PS00584|PFKB_KINASES_2|PDOC00504| SEG 39->54|ggkganqaiaaaraga| SEG 126->138|llldgaqalllql| SEG 157->175|vttvltpapaqplpqelle| SEG 269->274|aakaaa| BL:PDB:NREP 1 BL:PDB:REP 2->295|1rkdA|6e-28|32.8|293/306| RP:PDB:NREP 1 RP:PDB:REP 3->295|2c4eA|2e-33|17.2|290/299| RP:PFM:NREP 1 RP:PFM:REP 7->284|PF00294|2e-19|37.4|273/295|PfkB| HM:PFM:NREP 1 HM:PFM:REP 4->288|PF00294|7.6e-67|38.4|279/300|PfkB| RP:SCP:NREP 1 RP:SCP:REP 4->295|2fv7A1|3e-42|28.4|292/308|c.72.1.1| HM:SCP:REP 1->291|1dgmA_|1e-80|42.4|288/0|c.72.1.1|1/1|Ribokinase-like| OP:NHOMO 732 OP:NHOMOORG 533 OP:PATTERN ------11------11-1---11-----------1-----------------------------1--- 2-2--1112221111-111-11---111111-11111111-2---421---1323--2--1112-111232111121211--1-------2--1-----1-------1-1--------------------------21111----1-11----11-----------21111------------1-1-----121111111111111111321111111111-112------12111111111111111111112211111311123222211212211111111-1------------------------------------1----1111111111111--111112-11---1----1--11--111-1-1--1111------1-111--1----11111111-112---------12--233111234512--11-11121121-1--------11111-11----------------------------------------333443311112233222222433------111-------1-11-------11--------------1--1-----1--------1---------1-----------------------------113----1--1-11111-11111111-121-------------111111-1114134313-121113312313111111221211113323233333332322313311111--222222211222-------------11112111111-11111221------1-----11111111-1111-1121----1----11111111111112-----------------1----------------1--------------------------111--31112-- -----11-211----1--------------------------------11221112111---1111--1-1111--1--11--11111-------------------1-11----1--1--11----11261-112-------1---1--1------------112-111-1111-11-----1122311-21-----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 295 STR:RPRED 100.0 SQ:SECSTR ccEEEEEEcccEEEEEEEccccccTTcccccccEEEEEEcHHHHHHHHHHHTTcEEEEEcEEcTTTTTcHHHHHHHHTTcccTTcEEccccccEEEEEEcccccEEccEEcGGGGGGGGGcccccccEEEEEEccccHHHHHHHHHHHcTTcEEEEccGGGGGGccHHHHHHHHHTccEEEEEHHHHHHHHHHHTccHHHHHTTTTccEEEEEcGGGcEEEEccccEEEEcccccccccccTTHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHTTcccccTTcccHHHHHHH PSIPRED ccccEEEEccccHHHEEEccccccccccEEEcEEEEEEccHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHcccccEEEEEccccccEEEEEEcccccEEEEEEccccccccccccccHHHHccccEEEEEccccHHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHccccEEEEcHHHHHHHcccccHHHHHHHHHccccEEEEEEcccEEEEEEcccEEEEEcccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccHHHHHcc //