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Thermobifida fusca YX (tfus0)
Gene : AAZ54330.1
DDBJ      :             PAS
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.110.2d.110.3
:383 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   65->169 1d7eA PDBj 4e-07 16.2 %
:RPS:PDB   252->383 2avxA PDBj 8e-08 12.0 %
:RPS:SCOP  73->169 1d7eA  d.110.3.1 * 2e-07 17.5 %
:RPS:SCOP  294->383 1mc0A2  d.110.2.1 * 7e-09 23.0 %
:HMM:SCOP  73->169 1mzuA_ d.110.3.1 * 1.9e-10 22.9 %
:HMM:SCOP  229->384 1mc0A2 d.110.2.1 * 1.2e-10 30.6 %
:HMM:PFM   266->380 PF01590 * GAF 1.9e-12 29.8 114/154  
:HMM:PFM   82->158 PF08448 * PAS_4 4.2e-06 26.0 77/110  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54330.1 GT:GENE AAZ54330.1 GT:PRODUCT PAS GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(329916..331067) GB:FROM 329916 GB:TO 331067 GB:DIRECTION - GB:PRODUCT PAS GB:PROTEIN_ID AAZ54330.1 GB:DB_XREF GI:71914428 InterPro:IPR000014 InterPro:IPR003018 LENGTH 383 SQ:AASEQ MPEHLAKLEDAIAELRDRIAALRATHAMYPDDGATTAEAALAELGFAERLLRECGERLATLVSPATVRRNDNERTLLRAIFHELSIPVVLLDHEGYIRRINAMGAKLLDSTPGYLAGKPFSIFVDLRSRAALRSWQAAVSQGGETASFDSRLARRGYVEDVRLTISRLDVPSEPNPLLLVAMSPSLHPSSDTGPAPLETEVEDQVVVLAARRLDVLTRMTRLLLRSVGSSRTGTPLVLDEAAALLADSYADWVVIDLCEAPGKPDRLRRTAVAGPSGSELNGLVRSLEPDAAPLPREVLTTSKTVLRQLIDDETEFGATLDGLPVLSALRARSLLCVPLRDHDDVVYGALTLIRCSNRSSFRLADQGLLEEIGEHIGMALAKA GT:EXON 1|1-383:0| SEG 33->53|gattaeaalaelgfaerllre| SEG 205->216|vvvlaarrldvl| SEG 238->251|ldeaaalladsyad| RP:PDB:NREP 2 RP:PDB:REP 65->169|1d7eA|4e-07|16.2|105/119| RP:PDB:REP 252->383|2avxA|8e-08|12.0|125/171| HM:PFM:NREP 2 HM:PFM:REP 266->380|PF01590|1.9e-12|29.8|114/154|GAF| HM:PFM:REP 82->158|PF08448|4.2e-06|26.0|77/110|PAS_4| RP:SCP:NREP 2 RP:SCP:REP 73->169|1d7eA|2e-07|17.5|97/119|d.110.3.1| RP:SCP:REP 294->383|1mc0A2|7e-09|23.0|87/154|d.110.2.1| HM:SCP:REP 73->169|1mzuA_|1.9e-10|22.9|96/0|d.110.3.1|1/1|PYP-like sensor domain (PAS domain)| HM:SCP:REP 229->384|1mc0A2|1.2e-10|30.6|144/0|d.110.2.1|1/1|GAF domain-like| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 249 STR:RPRED 65.0 SQ:SECSTR ################################################################TcTTHHHHHHTccHHHHHTcccEEEEEcTTccEEEEcHHHHHHHcccHHHHTTcccccccGGccTTTHHHHHHHHHHTccEEEEEEEEccccccEEEEEEEEEccETTEcc#EEEEEE#####################################################################cEEEEEEEccTTccccEEEEEEcccHHHHHHHHHTTGGGTcGGGcTTTcTTccEEcEEEccTTTTcccHHHHHHHHHHTccEEEEEEEccTTccEEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHH DISOP:02AL 1-4, 287-291| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHccccEEEEccccEEEEEcHHHHHHccccHHHHcccccHHHcccHHHHHHHHHHHHHHcccccHHccHHHccccccccEEEEEEEEcccccccccEEEEEEcccccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccEEEEEEEccccccccEEEEEEEcccHHHHHHcccccccccccHHHHHHcccccccEEEccccccccccHHHHHHHHHHcccEEEEEEccccccEEEEEEEEEEccccccccHHHHHHHHHHHHHEEEEEEcc //