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Thermobifida fusca YX (tfus0)
Gene : AAZ54356.1
DDBJ      :             cobalamin biosynthesis protein CobG, precorrin-3B synthase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  124/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
d.134.1d.58.36
:439 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   73->424 2akjA PDBj 2e-10 25.8 %
:RPS:PDB   74->428 2akjA PDBj 4e-27 19.3 %
:RPS:SCOP  73->128 1zj8A2  d.58.36.1 * 5e-14 32.1 %
:RPS:SCOP  144->290 1zj8A4  d.134.1.1 * 4e-06 18.8 %
:RPS:SCOP  306->368 1aopA2  d.58.36.1 * 7e-06 19.0 %
:RPS:SCOP  373->431 1aopA4  d.134.1.1 * 2e-08 18.6 %
:HMM:SCOP  73->128 1aopA1 d.58.36.1 * 3.8e-08 37.5 %
:HMM:SCOP  294->369 1aopA2 d.58.36.1 * 7.9e-06 27.6 %
:HMM:SCOP  370->428 1aopA4 d.134.1.1 * 5.8e-05 23.7 %
:RPS:PFM   74->128 PF03460 * NIR_SIR_ferr 2e-08 38.2 %
:HMM:PFM   73->120 PF03460 * NIR_SIR_ferr 2.1e-13 37.5 48/69  
:HMM:PFM   306->362 PF03460 * NIR_SIR_ferr 3e-10 33.3 57/69  
:HMM:PFM   268->296 PF09806 * CDK2AP 0.00068 37.9 29/193  
:BLT:SWISS 73->426 NIR_SYNE7 3e-15 25.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54356.1 GT:GENE AAZ54356.1 GT:PRODUCT cobalamin biosynthesis protein CobG, precorrin-3B synthase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(356767..358086) GB:FROM 356767 GB:TO 358086 GB:DIRECTION - GB:PRODUCT cobalamin biosynthesis protein CobG, precorrin-3B synthase GB:PROTEIN_ID AAZ54356.1 GB:DB_XREF GI:71914454 LENGTH 439 SQ:AASEQ MAAGWFPQAKLDDSSITVARAAPVLHRSSRSPRRDHHSAGQESVCNHVPVFCLQPPDRCPGVLRPHFAADGALLRIRIPGGHISRRGIATLSQITAKFGDGNLHLTSRGNVQIRGIPVTDDQQIPNELPHIVAASGFLPSSTHDRVRNIVASPLSGIIGGRMDVRPLVSALDRALCTDPRLAELPGRFLFGLDDGRGDLAGMPIDLGIYAIDERSAQIRVGTFSGPVISSTEIVDIILDLAHRFLDISEGKWNVVQLPKKGRELLNNVEFSNFLRHTKSGDRWSVERFRRNILHGIITISTAESAVAGSVPLGVLTPPMQRALLDAAEHSDSTIILTPWRGVIVTPVPTDQASNVAALLQEAGLVLDPASPWSRISACIGSPGCARSRGDTRSQAVKLVRRLSSPDTSDDGSPYHIAGCERACGAPHTPHTLVLLGSST GT:EXON 1|1-439:0| BL:SWS:NREP 1 BL:SWS:REP 73->426|NIR_SYNE7|3e-15|25.7|346/512| SEG 26->38|hrssrsprrdhhs| BL:PDB:NREP 1 BL:PDB:REP 73->424|2akjA|2e-10|25.8|341/535| RP:PDB:NREP 1 RP:PDB:REP 74->428|2akjA|4e-27|19.3|352/535| RP:PFM:NREP 1 RP:PFM:REP 74->128|PF03460|2e-08|38.2|55/67|NIR_SIR_ferr| HM:PFM:NREP 3 HM:PFM:REP 73->120|PF03460|2.1e-13|37.5|48/69|NIR_SIR_ferr| HM:PFM:REP 306->362|PF03460|3e-10|33.3|57/69|NIR_SIR_ferr| HM:PFM:REP 268->296|PF09806|0.00068|37.9|29/193|CDK2AP| GO:PFM:NREP 2 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF03460|IPR005117| GO:PFM GO:0055114|"GO:oxidation reduction"|PF03460|IPR005117| RP:SCP:NREP 4 RP:SCP:REP 73->128|1zj8A2|5e-14|32.1|56/152|d.58.36.1| RP:SCP:REP 144->290|1zj8A4|4e-06|18.8|138/165|d.134.1.1| RP:SCP:REP 306->368|1aopA2|7e-06|19.0|63/80|d.58.36.1| RP:SCP:REP 373->431|1aopA4|2e-08|18.6|59/145|d.134.1.1| HM:SCP:REP 73->128|1aopA1|3.8e-08|37.5|56/0|d.58.36.1|1/2|Sulfite reductase, domains 1 and 3| HM:SCP:REP 294->369|1aopA2|7.9e-06|27.6|76/0|d.58.36.1|2/2|Sulfite reductase, domains 1 and 3| HM:SCP:REP 370->428|1aopA4|5.8e-05|23.7|59/145|d.134.1.1|2/2|Sulfite reductase hemoprotein (SiRHP), domains 2 and 4| OP:NHOMO 133 OP:NHOMOORG 127 OP:PATTERN ------------------1------------------------------------------------- --1---11---11-1-111-11--2111111111111111-11--------------1----2-111--11----------------------------------------------------------------------------111111--22-----1--111-21--------------1----------------------------------------------------------------------------------------------------------------------------------------------------------11---------------------1---------------------11111--------11111111111-------------------------------11----11-11111111------------------------------------------------111111-----1111111111111-----1111-----------------------------1-------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111121111111-111-----------------------------------------------------------------------------------------------1- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 359 STR:RPRED 81.8 SQ:SECSTR ########################################################################EEEcccGGGEEEHHHHHHHHHHHHTTGGccEEEcTTccEEEEEEcGGGHHHHHHHHHTHHHTTcccTTccccccccccccTTTTTTTcccccHHHHHHHHHHHTTTTTcccccccccEEEcccTTcTcGGGccEEEEEEEccccEEEccEEEEEEEEGGGHHHHHHHHHHHHHHGccHHHHHHHHcHHHHHHHHHTTcTTccccccccccccccccccccccEEEEcccTTEEEEEccGGGEEcHHHHHHHHHHHHHcccEEEEETTTEEEEEEEETTTHHHHTTcHHHHTTccccccTTTTEEEccGGGTcTTcccccHHHHHHHHHHHHHHEEcccccEEEEEccTTcTTcGGGccE######## DISOP:02AL 1-3, 26-42| PSIPRED cccccccccccccccEEHHHHHHHHHcccccccHHHHcccHHHHHHcccEEEcccccccccccEEEEcccEEEEEEEcccccccHHHHHHHHHHHHHHcccEEEEEcccEEEEEcccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHcccHHHHHHHHHHHHccccccccccEEEEEEEccccHHHHHHHcEEEEEEEcccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEccccEEEEEEEccccccHHHHHHHHHHHHHcccEEEEEccccEEEEcccHHHHHHHHHHHHHccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccEEEEEEccc //