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Thermobifida fusca YX (tfus0)
Gene : AAZ54405.1
DDBJ      :             putative transporter
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  88/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:462 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  317->405 1pw4A  f.38.1.1 * 2e-05 19.5 %
:HMM:SCOP  1->410 1pw4A_ f.38.1.1 * 2.6e-49 27.5 %
:RPS:PFM   310->391 PF00854 * PTR2 2e-04 31.7 %
:HMM:PFM   32->346 PF07690 * MFS_1 4.4e-20 21.6 310/353  
:BLT:SWISS 33->375 Y4WD_RHISN 3e-15 30.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54405.1 GT:GENE AAZ54405.1 GT:PRODUCT putative transporter GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(411886..413274) GB:FROM 411886 GB:TO 413274 GB:DIRECTION - GB:PRODUCT putative transporter GB:PROTEIN_ID AAZ54405.1 GB:DB_XREF GI:71914503 InterPro:IPR007114 LENGTH 462 SQ:AASEQ MPESQPVSPSHSRGEHPVPRRLRRARIALYAYFFVTGSVISIWASRIPAIKRQTGVDEGELSIALLALALGGVVTIRLMGGLLDRFNGRIIVPAAALVASIALVAPGYATNLQQLTLFLLLLGSSQALLNVSANLQAARLQREWGRPIMVSFHAVCSIGGGLGAIAGTLCVRAGLDVTTTFIGASSVLTLLSLLGRKWLLDTPALAAQRAPARPRFRRFALPRGRILLLGVLALCCMLAEGAANDWSALYTREMVGGSETAASATYAAYATMMAAGRLIGDRLVALFGPVNVVRGGSLLASFGLFFALVLPLQIPVIIGFALVGIGLSGIVPQVFNAAANDNPERSGRDLSTVTAIGYFGPLLGPPTIGFLADRAGLSVALLFPASLVLFIALGAGTLRTAEHREPRALRRSASSKSLRTGSMRLWVPPLRHLSENINGHRSEQSEETLPNNNHHDSGRETR GT:EXON 1|1-462:0| BL:SWS:NREP 1 BL:SWS:REP 33->375|Y4WD_RHISN|3e-15|30.0|337/377| TM:NTM 10 TM:REGION 26->48| TM:REGION 60->82| TM:REGION 87->109| TM:REGION 148->170| TM:REGION 182->204| TM:REGION 225->246| TM:REGION 269->291| TM:REGION 293->315| TM:REGION 350->372| TM:REGION 376->397| SEG 20->32|rrlrrarialyay| SEG 64->70|allalal| SEG 90->106|iivpaaalvasialvap| SEG 109->130|atnlqqltlfllllgssqalln| SEG 158->169|iggglgaiagtl| SEG 203->223|palaaqraparprfrrfalpr| SEG 227->239|lllgvlalccmla| SEG 260->275|taasatyaayatmmaa| SEG 295->308|ggsllasfglffal| SEG 407->419|ralrrsasskslr| RP:PFM:NREP 1 RP:PFM:REP 310->391|PF00854|2e-04|31.7|82/361|PTR2| HM:PFM:NREP 1 HM:PFM:REP 32->346|PF07690|4.4e-20|21.6|310/353|MFS_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00854|IPR000109| GO:PFM GO:0006857|"GO:oligopeptide transport"|PF00854|IPR000109| GO:PFM GO:0016020|"GO:membrane"|PF00854|IPR000109| RP:SCP:NREP 1 RP:SCP:REP 317->405|1pw4A|2e-05|19.5|87/434|f.38.1.1| HM:SCP:REP 1->410|1pw4A_|2.6e-49|27.5|404/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 104 OP:NHOMOORG 88 OP:PATTERN -------------------------------------------------------------------- --1-1----------------1-----------1111122-1------1------1-----1----11113----------------------------1-2---3-1---------------------------------------------------------------------------11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------11--1--112322211---------1-----------------1-------------------------------------1-----11211111111--111111--11------------1-----------------------------------------------------------1--------------------------------------------------------------------------1-------------------------------------12-------------------1---------21111111-111---------------------------------------1----1-1-1--11------111------------------------1-----------------------------------------------------------------------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-18, 201-220, 407-420, 435-462| PSIPRED ccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHccccEEEccEEEEccHHHHHHHHccccccccHHHccccccccccccccc //