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Thermobifida fusca YX (tfus0)
Gene : AAZ54436.1
DDBJ      :             TatD-related deoxyribonuclease
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  904/915 : Eukaryota  43/199 : Viruses  0/175   --->[See Alignment]
c.1.9
:306 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   138->303 1yixA PDBj 1e-29 41.2 %
:RPS:PDB   45->305 3cjpA PDBj 5e-18 9.9 %
:RPS:SCOP  34->303 1j6oA  c.1.9.12 * 6e-48 28.9 %
:HMM:SCOP  32->307 1xwyA1 c.1.9.12 * 3.9e-73 40.1 %
:RPS:PFM   34->303 PF01026 * TatD_DNase 2e-38 37.3 %
:HMM:PFM   34->303 PF01026 * TatD_DNase 3.3e-73 41.9 246/255  
:BLT:SWISS 34->305 YABD_BACSU 1e-34 36.8 %
:PROS 240->256|PS01091|TATD_3
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54436.1 GT:GENE AAZ54436.1 GT:PRODUCT TatD-related deoxyribonuclease GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 443951..444871 GB:FROM 443951 GB:TO 444871 GB:DIRECTION + GB:PRODUCT TatD-related deoxyribonuclease GB:PROTEIN_ID AAZ54436.1 GB:DB_XREF GI:71914534 InterPro:IPR001130 LENGTH 306 SQ:AASEQ MLSVSKSRRQREKRDRARTEPPPLPEPLRVAVPDCHTHMDMQGGDVAEIVAKAASVGVTPIIQVGCDVAGSRWAVQAAAEHDTVWAAVALHPNEAPRIVHGVPEDEATEWEPARPAGGEAALEEALAEIDALAAHEKVCAIGETGLDCYRTGPEGFDIQERSFRAHIAIAQRHGKALMIHDRDAHEDVLRVLEDAGAPERVVFHCFSGDAAMAKLCADRGYYMSFAGNVTFGSAQQLRDAAAVVPLELLLVETDAPFLTPKPHRGRPNAPYLIPHTLRALAELKGMAEDELAETVAANARRAFALP GT:EXON 1|1-306:0| BL:SWS:NREP 1 BL:SWS:REP 34->305|YABD_BACSU|1e-34|36.8|247/255| PROS 240->256|PS01091|TATD_3|PDOC00836| SEG 17->33|arteppplpeplrvavp| SEG 109->136|eweparpaggeaaleealaeidalaahe| SEG 240->252|aaavvplelllve| BL:PDB:NREP 1 BL:PDB:REP 138->303|1yixA|1e-29|41.2|165/265| RP:PDB:NREP 1 RP:PDB:REP 45->305|3cjpA|5e-18|9.9|212/262| RP:PFM:NREP 1 RP:PFM:REP 34->303|PF01026|2e-38|37.3|249/255|TatD_DNase| HM:PFM:NREP 1 HM:PFM:REP 34->303|PF01026|3.3e-73|41.9|246/255|TatD_DNase| GO:PFM:NREP 1 GO:PFM GO:0016888|"GO:endodeoxyribonuclease activity, producing 5'-phosphomonoesters"|PF01026|IPR001130| RP:SCP:NREP 1 RP:SCP:REP 34->303|1j6oA|6e-48|28.9|246/260|c.1.9.12| HM:SCP:REP 32->307|1xwyA1|3.9e-73|40.1|252/0|c.1.9.12|1/1|Metallo-dependent hydrolases| OP:NHOMO 1309 OP:NHOMOORG 969 OP:PATTERN ---------------12-1-1-----------22111-----------11111111-1-11---11-- 1111111111111111111-121111111111111111111111111111111111111111111111111111111111-1111111111-11111--1121111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112211111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111211111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111121112222222111112222111112222222212111111221111212221122221122221111212211111211111111222222212112121111111111111111111111111111223323222333222222323222222312221-11-1211111133323323333333333-33333333333333333333233322233333333333333332332333311222232223233111311111111112323222221111212112222222211121223211112121222231111111111333333333333332112222222111111211111111111111122111112-112-1111111111211111111111111111 ----221-------1----------------------------------------------------------------------------1---------------111--21-----1----1-1---2---11-1---1212--1-1---2----3----111----21221-1-1511--------1---2121- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 273 STR:RPRED 89.2 SQ:SECSTR #################################EEEEcTTccccHHHHHHHHHHHHTTccTTcHHHHHHHHHHHHHHHHHcTTTEEEEEcccTTccGGccHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHccTTcTccEEEEEcccTTcTTTccHHHGGGGHHHHHHHHHTTcccEEEcccTTccHHHHHHHHcTTccEEEGGGGGGGHHHHHHHHHHcTTEEEEcTTccGccHHHHHHHHHHcTTTEEccccTTcccHcTTcTTHccGGGHHHHHHHHHHHHcccHHHHHHHHTHHHHHHHTcT DISOP:02AL 1-22| PSIPRED ccccccHHHcccccccccccccccccccccEEEEEEEccccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHcccEEEEEEEcccHHHHHHcccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHcccEEEEccEEccccHHHHHHHHHHcccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccc //