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Thermobifida fusca YX (tfus0)
Gene : AAZ54445.1
DDBJ      :             4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
Swiss-Prot:ISPE_THEFY   RecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;         Short=CMK;         EC=2.7.1.148;AltName: Full=4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase;

Homologs  Archaea  0/68 : Bacteria  87/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.14.1d.58.26
:307 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->51 1uekA PDBj 6e-05 52.5 %
:RPS:PDB   2->201 2a2cA PDBj 3e-12 12.8 %
:RPS:SCOP  12->171 1oj4A1  d.14.1.5 * 4e-24 28.0 %
:RPS:SCOP  177->304 1oj4A2  d.58.26.5 * 5e-05 14.3 %
:HMM:SCOP  5->171 1oj4A1 d.14.1.5 * 1.9e-38 47.1 %
:HMM:SCOP  174->299 1uekA2 d.58.26.5 * 1.2e-22 40.0 %
:HMM:PFM   214->289 PF08544 * GHMP_kinases_C 2.2e-15 40.8 76/82  
:HMM:PFM   99->152 PF00288 * GHMP_kinases_N 3.3e-10 38.9 54/68  
:BLT:SWISS 1->307 ISPE_THEFY e-120 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54445.1 GT:GENE AAZ54445.1 GT:PRODUCT 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 458401..459324 GB:FROM 458401 GB:TO 459324 GB:DIRECTION + GB:PRODUCT 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase GB:PROTEIN_ID AAZ54445.1 GB:DB_XREF GI:71914543 InterPro:IPR004424 LENGTH 307 SQ:AASEQ MNAPTSVTVRVPAKVNLRLAVGPVRGDGYHGLVNVFHAVSLYDEVTVSPRSDLAPGQAVLSVDGERPDHVARVPLDDSNLAARAAALLARHVPHATGVHIHVHKAIPVAGGMAGGSADAAAALVACDALWEGGTPRERLLELAAELGSDVAFPLIGCTAVGTGRGEQLSPLPVQGTFHWVFALVDGGLSTTKVFAEYDRLRPDAPEPTLDDALVAALAAGDARRLGAALTNDLQPAALALRPELGDLLEAGRAAGALGALVSGSGPTCAFLAESADHARELAAALRASGTCADTVTAHGPVPGATVV GT:EXON 1|1-307:0| SW:ID ISPE_THEFY SW:DE RecName: Full=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Short=CMK; EC=2.7.1.148;AltName: Full=4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase; SW:GN Name=ispE; OrderedLocusNames=Tfu_0407; SW:KW ATP-binding; Complete proteome; Isoprene biosynthesis; Kinase;Nucleotide-binding; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->307|ISPE_THEFY|e-120|100.0|307/307| GO:SWS:NREP 5 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0008299|"GO:isoprenoid biosynthetic process"|Isoprene biosynthesis| GO:SWS GO:0016301|"GO:kinase activity"|Kinase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| SEG 80->90|laaraaallar| SEG 108->129|vaggmaggsadaaaalvacdal| SEG 136->146|rerllelaael| SEG 209->229|lddalvaalaagdarrlgaal| SEG 244->263|lgdlleagraagalgalvsg| BL:PDB:NREP 1 BL:PDB:REP 12->51|1uekA|6e-05|52.5|40/268| RP:PDB:NREP 1 RP:PDB:REP 2->201|2a2cA|3e-12|12.8|195/446| HM:PFM:NREP 2 HM:PFM:REP 214->289|PF08544|2.2e-15|40.8|76/82|GHMP_kinases_C| HM:PFM:REP 99->152|PF00288|3.3e-10|38.9|54/68|GHMP_kinases_N| RP:SCP:NREP 2 RP:SCP:REP 12->171|1oj4A1|4e-24|28.0|150/163|d.14.1.5| RP:SCP:REP 177->304|1oj4A2|5e-05|14.3|112/120|d.58.26.5| HM:SCP:REP 5->171|1oj4A1|1.9e-38|47.1|157/163|d.14.1.5|1/1|Ribosomal protein S5 domain 2-like| HM:SCP:REP 174->299|1uekA2|1.2e-22|40.0|120/120|d.58.26.5|1/1|GHMP Kinase, C-terminal domain| OP:NHOMO 88 OP:NHOMOORG 88 OP:PATTERN -------------------------------------------------------------------- ----1111111---11111-11111111111111111111111111111111111-11--11111111111-----------------------------------------------------------1---1------111--1-11--1-------------11111--------------------------------------11-------1111-1-------1-----------------------------------------------111----------------------------------------1-------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 239 STR:RPRED 77.9 SQ:SECSTR #cccccEEEEEEEEEEEEccccEETTcGGGTcccEEEEEEEEEEEEEEEcccEEEccTTcccEEEcccccccccccHHHHHHHHHHHHHHHccccccEEEEEEEcccTTccccHHHHHHHHHHHHHHHHHTccccHHHGGGTcccccHHHHHHHHccTTcEEETTTEEEEEcccTTEEEEEEEccccccGGGccHHHHHHHHHHHTcEEEETTccEEEEEEccccc###ccccTTEEEEEEEE################################################################ DISOP:02AL 1-4| PSIPRED cccccEEEEEEcEEEEEEEEEEcccccccccEEEEEEEEccccEEEEEEcccccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccEEEEccEEEEEEcccEEEEcccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccEEEEEccccEEEEEEccHHHHHHHHHHHHHcccEEEEEEEcccccccEEc //