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Thermobifida fusca YX (tfus0)
Gene : AAZ54449.1
DDBJ      :             regulatory protein, MarR
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  178/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:164 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   38->157 1jgsA PDBj 9e-10 36.5 %
:RPS:PDB   24->162 3bpxB PDBj 1e-15 21.3 %
:RPS:SCOP  3->162 2fbkA1  a.4.5.28 * 3e-31 30.1 %
:HMM:SCOP  12->162 2fbkA1 a.4.5.28 * 1.8e-33 37.1 %
:HMM:PFM   54->111 PF01047 * MarR 1.5e-12 36.4 55/59  
:BLT:SWISS 4->156 PECS_DICD3 2e-29 39.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54449.1 GT:GENE AAZ54449.1 GT:PRODUCT regulatory protein, MarR GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION complement(462889..463383) GB:FROM 462889 GB:TO 463383 GB:DIRECTION - GB:PRODUCT regulatory protein, MarR GB:PROTEIN_ID AAZ54449.1 GB:DB_XREF GI:71914547 InterPro:IPR000835 LENGTH 164 SQ:AASEQ MRDEVDGLVEAWRTERPDLDVAPLQVLSRVSRLARHLDRARRSVFAAHDLEPWEFDVLAELRRSGHPYELSPGRLMRATLVTSGTMTNRIDRLTEDGLVRRLPDPTDRRGVLVRLTDEGRERVDAALADLLRYEESLLAALTTAERDQLATLLRTVLAPLDEPD GT:EXON 1|1-164:0| BL:SWS:NREP 1 BL:SWS:REP 4->156|PECS_DICD3|2e-29|39.9|153/166| BL:PDB:NREP 1 BL:PDB:REP 38->157|1jgsA|9e-10|36.5|115/138| RP:PDB:NREP 1 RP:PDB:REP 24->162|3bpxB|1e-15|21.3|136/138| HM:PFM:NREP 1 HM:PFM:REP 54->111|PF01047|1.5e-12|36.4|55/59|MarR| RP:SCP:NREP 1 RP:SCP:REP 3->162|2fbkA1|3e-31|30.1|153/156|a.4.5.28| HM:SCP:REP 12->162|2fbkA1|1.8e-33|37.1|151/0|a.4.5.28|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 243 OP:NHOMOORG 178 OP:PATTERN -------------------------------------------------------------------- 1---81-------------------1------1-2-1322-312121122212---------212154631---------------------------------------------------------------1---------1-1--------11---------1-1--------------11--------1------------------------------1------------------------------------------------------1111111111------------------------1--------1----1----------------------1----------------------1--111-------1-1-------------------2-11111----1--2221112221212---1--2-----23--------------1---------------------------------1-11111--1111111111---21111111212121--213--1--2-----1----222------------1-------1---1----------1--1--12---1--------------------------111--------1111111-111111-111---------------122---------------------------------11111--------------------------------------------------------2-------------------------------------11112------------------1111111111-----------------------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 152 STR:RPRED 92.7 SQ:SECSTR ############cTTcccHHHHTccHHHHHHHHHHHHHHHHHHHHGGGTccHHHHHHHHHHHHcTTEEcccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEEEETTEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHTTTccHHHHHHHHHHHHHHHHHHHHcc DISOP:02AL 1-3, 161-164| PSIPRED cccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccHHHHHHHHccccHHHHHHHHHHHHcccEEcccccccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccc //