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Thermobifida fusca YX (tfus0)
Gene : AAZ54476.1
DDBJ      :             cystathionine beta-synthase
Swiss-Prot:             

Homologs  Archaea  45/68 : Bacteria  805/915 : Eukaryota  182/199 : Viruses  0/175   --->[See Alignment]
c.79.1d.37.1
:455 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->317 1m54E PDBj 2e-67 44.4 %
:RPS:PDB   2->318 1d6sA PDBj 4e-55 31.7 %
:RPS:PDB   339->454 3ctuA PDBj 3e-14 18.2 %
:RPS:SCOP  2->318 1d6sA  c.79.1.1 * 9e-87 32.1 %
:RPS:SCOP  329->454 1pvmA4  d.37.1.1 * 1e-15 26.4 %
:HMM:SCOP  1->321 1z7wA1 c.79.1.1 * 1.7e-94 39.4 %
:HMM:SCOP  334->394 1zfjA2 d.37.1.1 * 1.7e-06 36.2 %
:HMM:SCOP  397->457 1yavA2 d.37.1.1 * 2.3e-07 34.4 %
:RPS:PFM   10->269 PF00291 * PALP 7e-23 40.5 %
:RPS:PFM   339->388 PF00571 * CBS 3e-04 42.2 %
:HMM:PFM   10->295 PF00291 * PALP 1.3e-62 33.2 271/297  
:HMM:PFM   339->392 PF00571 * CBS 2.9e-11 46.9 49/57  
:HMM:PFM   402->454 PF00571 * CBS 6.8e-11 35.8 53/57  
:BLT:SWISS 2->402 CBS_MOUSE 3e-76 44.1 %
:PROS 177->202|PS00217|SUGAR_TRANSPORT_2
:PROS 33->51|PS00901|CYS_SYNTHASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAZ54476.1 GT:GENE AAZ54476.1 GT:PRODUCT cystathionine beta-synthase GT:DATABASE GIB00263CH01 GT:ORG tfus0 GB:ACCESSION GIB00263CH01 GB:LOCATION 496293..497660 GB:FROM 496293 GB:TO 497660 GB:DIRECTION + GB:PRODUCT cystathionine beta-synthase GB:PROTEIN_ID AAZ54476.1 GB:DB_XREF GI:71914574 InterPro:IPR000644 InterPro:IPR001216 InterPro:IPR001926 InterPro:IPR005829 InterPro:IPR005857 LENGTH 455 SQ:AASEQ MRVSNSLIELVGNTPLVRLKKVTAGLAPTVLAKVEYFNPGGSVKDRIALRMVEDAERRGLLKPGGTIVEPTSGNTGVGLAIVAAEKGYRCVFVCPDKVGADKLAVLRAYGAEVVVCPTTVAPDHPESYYSVSDRLAATIPGAWKPDQYSNPNNPESHYYSTGPEIWEQTEGRITHFVAGIGTGGTITGTGRYLKEVSNGRVKVIGADPEGSVYSGGTGRPYLVEGVGEDIWPATYDTKICDEIIAVSDKDSFLMTRRLAKEEALLVGGSCGLAVVAALKVAAQAGPDDVIVVLLPDGGRGYLGKIFNDEWMADYGFLEPETEEATAGQVLAAKDDSLPEFVHTHPHETVGTAIAIMREYGVSQLPVMKEEPPVMAAEVVGAIAERDLLDALFNGRAQLGDPVEQHMRPPLPVVGSGEPVSRCVELLQSSGAVVVLEDGKPSGILTRQDLLAHLAS GT:EXON 1|1-455:0| BL:SWS:NREP 1 BL:SWS:REP 2->402|CBS_MOUSE|3e-76|44.1|395/561| PROS 177->202|PS00217|SUGAR_TRANSPORT_2|PDOC00190| PROS 33->51|PS00901|CYS_SYNTHASE|PDOC00700| SEG 179->190|gigtggtitgtg| SEG 272->284|lavvaalkvaaqa| BL:PDB:NREP 1 BL:PDB:REP 2->317|1m54E|2e-67|44.4|311/347| RP:PDB:NREP 2 RP:PDB:REP 2->318|1d6sA|4e-55|31.7|312/322| RP:PDB:REP 339->454|3ctuA|3e-14|18.2|110/139| RP:PFM:NREP 2 RP:PFM:REP 10->269|PF00291|7e-23|40.5|252/293|PALP| RP:PFM:REP 339->388|PF00571|3e-04|42.2|45/56|CBS| HM:PFM:NREP 3 HM:PFM:REP 10->295|PF00291|1.3e-62|33.2|271/297|PALP| HM:PFM:REP 339->392|PF00571|2.9e-11|46.9|49/57|CBS| HM:PFM:REP 402->454|PF00571|6.8e-11|35.8|53/57|CBS| GO:PFM:NREP 3 GO:PFM GO:0003824|"GO:catalytic activity"|PF00291|IPR001926| GO:PFM GO:0008152|"GO:metabolic process"|PF00291|IPR001926| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00291|IPR001926| RP:SCP:NREP 2 RP:SCP:REP 2->318|1d6sA|9e-87|32.1|312/323|c.79.1.1| RP:SCP:REP 329->454|1pvmA4|1e-15|26.4|121/142|d.37.1.1| HM:SCP:REP 1->321|1z7wA1|1.7e-94|39.4|317/0|c.79.1.1|1/1|Tryptophan synthase beta subunit-like PLP-dependent enzymes| HM:SCP:REP 334->394|1zfjA2|1.7e-06|36.2|58/64|d.37.1.1|1/2|CBS-domain| HM:SCP:REP 397->457|1yavA2|2.3e-07|34.4|61/0|d.37.1.1|2/2|CBS-domain| OP:NHOMO 2410 OP:NHOMOORG 1032 OP:PATTERN 11211211111111112-------2222134211--------133-11-111--11--1132221--1 4232221222222142244-43224243344334448246143212212221333122--533233662421111111-2124111112221-1-----32423321133---------------2222232332222222111313224224222422222222225542222222222222211111111343333333333333433233333333331322111111552333333333333322222222-21122-2-112212-2--1122211111111111111111111111111111111111112221111254233333333332223312222121-12221213222131332211213133223-----222232223433313222222123122222323162-4222224222222223321122223122222222222222424-----------------------------1222221111122212222222111333343221235331211322222233222113112232111111112222332411221132111-232232342555549322111111111112111111121111112211221221112222213222212322211--22211--11133422332222222222-2222222222222222222343336532222222222222222422222222-34443443443211131111111112243211111111111111122222221112243333334233322533211111111121122222211111222222222222221121333322------------------------------------2112211111122 ----234-421-2243333333334333323333333555555322334633743433333333333323223332212233333322-45333333333333444-4G23222421111111133-216C1-222-11-1111--11--21-21121113424223222158343445r444655BFG2F53497667 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 454 STR:RPRED 99.8 SQ:SECSTR ccccccGGGGcccccEEEccccTTcccccEEEEETTccTTccTTHHHHHHHHHHHHHTTcccTTcEEEEEcccHHHHHHHHHHHHHTccEEEEEETTccHHHHHHHHHTTcEEEEEcGGGccHHHHHHHHHHHHHHHcTTTEEEccTTTcTHHHHHHHHTHHHHHHHHTTTcccEEEEEccccHHHHHHHHHHHTTcccTcEEEEEEETTcHHHHHcccccccTTcccccccTTccGGGccEEEEEcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHTTcGGTTccEEEEEcccGGGGTTcHHHHTTccHHHHccTTccccccHHHccccHHHHHHHHHHHTccccHHHHHHHHTTcccTcEEEEccHHHHHTcccEEEEHHHHHHHHHTccHHHHTccGGGcccccccccccccHHHHHHHTTTccEEEEcTTccEEEEEETTHHHHHHH# DISOP:02AL 395-399| PSIPRED ccccccHHHHHccccEEEccccccccccEEEEEEccccccEEHHHHHHHHHHHHHHHccccccccEEEEEcccHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHccEEEEEccccccccHHHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHHccccEEEEEEcccccHHcccccccccccccccccccHHHHHHHcccEEEEcHHHHHHHHHHHHHHccEEEEcHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHccHHHHHHHHHcccccccccccccccccccccccEEEEccHHHHHHHHHHHHHcccccccEEcccccccccEEEEEEEHHHHHHHHHccccccccHHHHHHccccEEEcccccHHHHHHHHHcccccEEEEccEEEEEEEHHHHHHHHHc //